{"accession":"OZ372957.1","bioprojects":["PRJEB37886"],"biosample":"SAMEA120641319","completeness":"COMPLETE","host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isolate":{"collectionDate":"2025-11-05"},"length":29847,"location":{"geographicLocation":"United Kingdom:Wales","geographicRegion":"Europe"},"nucleotide":{"sequenceHash":"594FD506"},"releaseDate":"2025-11-29T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"Public Health Wales Microbiology Cardiff, University Hospital Wales Cardiff Wales Cf14 4Xw"},"updateDate":"2025-11-30T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"OZ372958.1","bioprojects":["PRJEB37886"],"biosample":"SAMEA120641330","completeness":"COMPLETE","host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isolate":{"collectionDate":"2025-11-11"},"length":29847,"location":{"geographicLocation":"United Kingdom:Wales","geographicRegion":"Europe"},"nucleotide":{"sequenceHash":"C64FD398"},"releaseDate":"2025-11-29T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"Public Health Wales Microbiology Cardiff, University Hospital Wales Cardiff Wales Cf14 4Xw"},"updateDate":"2025-11-30T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"OZ372959.1","bioprojects":["PRJEB37886"],"biosample":"SAMEA120641324","completeness":"COMPLETE","host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isolate":{"collectionDate":"2025-11-11"},"length":29847,"location":{"geographicLocation":"United Kingdom:Wales","geographicRegion":"Europe"},"nucleotide":{"sequenceHash":"943AD4FD"},"releaseDate":"2025-11-29T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"Public Health Wales Microbiology Cardiff, University Hospital Wales Cardiff Wales Cf14 4Xw"},"updateDate":"2025-11-30T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"OZ372960.1","bioprojects":["PRJEB37886"],"biosample":"SAMEA120641332","completeness":"COMPLETE","host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isolate":{"collectionDate":"2025-11-06"},"length":29847,"location":{"geographicLocation":"United Kingdom:Wales","geographicRegion":"Europe"},"nucleotide":{"sequenceHash":"53A7CF18"},"releaseDate":"2025-11-29T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"Public Health Wales Microbiology Cardiff, University Hospital Wales Cardiff Wales Cf14 4Xw"},"updateDate":"2025-11-30T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"PQ.2","taxId":2697049}}
{"accession":"OZ372961.1","bioprojects":["PRJEB37886"],"biosample":"SAMEA120641333","completeness":"COMPLETE","host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isolate":{"collectionDate":"2025-11-11"},"length":29847,"location":{"geographicLocation":"United Kingdom:Wales","geographicRegion":"Europe"},"nucleotide":{"sequenceHash":"1515C2B7"},"releaseDate":"2025-11-29T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"Public Health Wales Microbiology Cardiff, University Hospital Wales Cardiff Wales Cf14 4Xw"},"updateDate":"2025-11-30T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"OZ372962.1","bioprojects":["PRJEB37886"],"biosample":"SAMEA120641322","completeness":"COMPLETE","host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isolate":{"collectionDate":"2025-11-07"},"length":29847,"location":{"geographicLocation":"United Kingdom:Wales","geographicRegion":"Europe"},"nucleotide":{"sequenceHash":"B471A49E"},"releaseDate":"2025-11-29T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"Public Health Wales Microbiology Cardiff, University Hospital Wales Cardiff Wales Cf14 4Xw"},"updateDate":"2025-11-30T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"OZ372963.1","bioprojects":["PRJEB37886"],"biosample":"SAMEA120641326","completeness":"COMPLETE","host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isolate":{"collectionDate":"2025-11-13"},"length":29847,"location":{"geographicLocation":"United Kingdom:Wales","geographicRegion":"Europe"},"nucleotide":{"sequenceHash":"6E37D533"},"releaseDate":"2025-11-29T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"Public Health Wales Microbiology Cardiff, University Hospital Wales Cardiff Wales Cf14 4Xw"},"updateDate":"2025-11-30T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"OZ372964.1","bioprojects":["PRJEB37886"],"biosample":"SAMEA120641323","completeness":"COMPLETE","host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isolate":{"collectionDate":"2025-11-04"},"length":29847,"location":{"geographicLocation":"United Kingdom:Wales","geographicRegion":"Europe"},"nucleotide":{"sequenceHash":"E044D2B2"},"releaseDate":"2025-11-29T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"Public Health Wales Microbiology Cardiff, University Hospital Wales Cardiff Wales Cf14 4Xw"},"updateDate":"2025-11-30T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"LF.7","taxId":2697049}}
{"accession":"OZ372965.1","bioprojects":["PRJEB37886"],"biosample":"SAMEA120641325","completeness":"COMPLETE","host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isolate":{"collectionDate":"2025-11-12"},"length":29850,"location":{"geographicLocation":"United Kingdom:Wales","geographicRegion":"Europe"},"nucleotide":{"sequenceHash":"CE9BB50F"},"releaseDate":"2025-11-29T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"Public Health Wales Microbiology Cardiff, University Hospital Wales Cardiff Wales Cf14 4Xw"},"updateDate":"2025-11-30T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"PQ.4","taxId":2697049}}
{"accession":"OZ372966.1","bioprojects":["PRJEB37886"],"biosample":"SAMEA120641329","completeness":"COMPLETE","host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isolate":{"collectionDate":"2025-11-13"},"length":29838,"location":{"geographicLocation":"United Kingdom:Wales","geographicRegion":"Europe"},"nucleotide":{"sequenceHash":"38E5D4A3"},"releaseDate":"2025-11-29T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"Public Health Wales Microbiology Cardiff, University Hospital Wales Cardiff Wales Cf14 4Xw"},"updateDate":"2025-11-30T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"OZ372967.1","bioprojects":["PRJEB37886"],"biosample":"SAMEA120641318","completeness":"COMPLETE","host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isolate":{"collectionDate":"2025-11-13"},"length":29847,"location":{"geographicLocation":"United Kingdom:Wales","geographicRegion":"Europe"},"nucleotide":{"sequenceHash":"B8B7D556"},"releaseDate":"2025-11-29T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"Public Health Wales Microbiology Cardiff, University Hospital Wales Cardiff Wales Cf14 4Xw"},"updateDate":"2025-11-30T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"OZ372968.1","bioprojects":["PRJEB37886"],"biosample":"SAMEA120641328","completeness":"COMPLETE","host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isolate":{"collectionDate":"2025-11-09"},"length":29847,"location":{"geographicLocation":"United Kingdom:Wales","geographicRegion":"Europe"},"nucleotide":{"sequenceHash":"7F7ED49E"},"releaseDate":"2025-11-29T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"Public Health Wales Microbiology Cardiff, University Hospital Wales Cardiff Wales Cf14 4Xw"},"updateDate":"2025-11-30T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"OZ372969.1","bioprojects":["PRJEB37886"],"biosample":"SAMEA120641334","completeness":"COMPLETE","host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isolate":{"collectionDate":"2025-11-13"},"length":29850,"location":{"geographicLocation":"United Kingdom:Wales","geographicRegion":"Europe"},"nucleotide":{"sequenceHash":"CA37CE14"},"releaseDate":"2025-11-29T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"Public Health Wales Microbiology Cardiff, University Hospital Wales Cardiff Wales Cf14 4Xw"},"updateDate":"2025-11-30T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"OZ373020.1","bioprojects":["PRJEB37886"],"biosample":"SAMEA120641321","completeness":"COMPLETE","host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isolate":{"collectionDate":"2025-11-09"},"length":29847,"location":{"geographicLocation":"United Kingdom:Wales","geographicRegion":"Europe"},"nucleotide":{"sequenceHash":"AD1DD4A8"},"releaseDate":"2025-11-30T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"Public Health Wales Microbiology Cardiff, University Hospital Wales Cardiff Wales Cf14 4Xw"},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"OZ373021.1","bioprojects":["PRJEB37886"],"biosample":"SAMEA120641331","completeness":"COMPLETE","host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isolate":{"collectionDate":"2025-11-12"},"length":29847,"location":{"geographicLocation":"United Kingdom:Wales","geographicRegion":"Europe"},"nucleotide":{"sequenceHash":"C3C7D55D"},"releaseDate":"2025-11-30T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"Public Health Wales Microbiology Cardiff, University Hospital Wales Cardiff Wales Cf14 4Xw"},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"OZ373022.1","bioprojects":["PRJEB37886"],"biosample":"SAMEA120641327","completeness":"COMPLETE","host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isolate":{"collectionDate":"2025-11-10"},"length":29847,"location":{"geographicLocation":"United Kingdom:Wales","geographicRegion":"Europe"},"nucleotide":{"sequenceHash":"54FFD4B1"},"releaseDate":"2025-11-30T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"Public Health Wales Microbiology Cardiff, University Hospital Wales Cardiff Wales Cf14 4Xw"},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"OZ373023.1","bioprojects":["PRJEB37886"],"biosample":"SAMEA120641320","completeness":"COMPLETE","host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isolate":{"collectionDate":"2025-11-11"},"length":29847,"location":{"geographicLocation":"United Kingdom:Wales","geographicRegion":"Europe"},"nucleotide":{"sequenceHash":"EA9BD507"},"releaseDate":"2025-11-30T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"Public Health Wales Microbiology Cardiff, University Hospital Wales Cardiff Wales Cf14 4Xw"},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"LF.7","taxId":2697049}}
{"accession":"PV639771.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2023-12","name":"SARS-CoV-2/human/CHN/HT/2023","source":"lung, oronasopharynx"},"length":29833,"location":{"geographicLocation":"China: Jilin, Changchun","geographicRegion":"Asia"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"306AD527"},"proteinCount":12,"releaseDate":"2025-11-30T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"Jilin University, The first hospital of Jilin University","country":"China","names":["Song,Z.X.","Sui,L.Y.","Liu,Q."]},"updateDate":"2025-11-30T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"JN.1","taxId":2697049}}
{"accession":"PX626520.1","bioprojects":["PRJNA777596"],"biosample":"SAMN53485131","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-31","name":"SARS-CoV-2/human/USA/CT-DPH-1332645001/2025"},"length":29715,"location":{"geographicLocation":"USA","geographicRegion":"North America"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"F727D6A5"},"proteinCount":12,"releaseDate":"2025-11-28T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"CT State Public Health Laboratory Submission Group, Katherine A. Kelley State Public Health Laboratory","country":"USA","names":["Incekara,K.","Pearson,C.","Nguyen,T.","Perera,N."]},"updateDate":"2025-11-28T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX626524.1","bioprojects":["PRJNA777596"],"biosample":"SAMN53485136","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-28","name":"SARS-CoV-2/human/USA/CT-DPH-1330744001/2025"},"length":29715,"location":{"geographicLocation":"USA","geographicRegion":"North America"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"7B71D820"},"proteinCount":12,"releaseDate":"2025-11-28T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"CT State Public Health Laboratory Submission Group, Katherine A. Kelley State Public Health Laboratory","country":"USA","names":["Incekara,K.","Pearson,C.","Nguyen,T.","Perera,N."]},"updateDate":"2025-11-28T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX626525.1","bioprojects":["PRJNA777596"],"biosample":"SAMN53485137","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-06","name":"SARS-CoV-2/human/USA/CT-DPH-1333568001/2025"},"length":29715,"location":{"geographicLocation":"USA","geographicRegion":"North America"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"FAACD564"},"proteinCount":12,"releaseDate":"2025-11-28T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"CT State Public Health Laboratory Submission Group, Katherine A. Kelley State Public Health Laboratory","country":"USA","names":["Incekara,K.","Pearson,C.","Nguyen,T.","Perera,N."]},"updateDate":"2025-11-28T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.2","taxId":2697049}}
{"accession":"PX626535.1","bioprojects":["PRJNA777596"],"biosample":"SAMN53485147","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-27","name":"SARS-CoV-2/human/USA/CT-DPH-1330819001/2025"},"length":29679,"location":{"geographicLocation":"USA","geographicRegion":"North America"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"926DD976"},"proteinCount":12,"releaseDate":"2025-11-28T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"CT State Public Health Laboratory Submission Group, Katherine A. Kelley State Public Health Laboratory","country":"USA","names":["Incekara,K.","Pearson,C.","Nguyen,T.","Perera,N."]},"updateDate":"2025-11-28T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.1","taxId":2697049}}
{"accession":"PX626540.1","bioprojects":["PRJNA777596"],"biosample":"SAMN53485152","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-08","name":"SARS-CoV-2/human/USA/CT-DPH-1333560001/2025"},"length":29703,"location":{"geographicLocation":"USA","geographicRegion":"North America"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"65D8D8C9"},"proteinCount":12,"releaseDate":"2025-11-28T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"CT State Public Health Laboratory Submission Group, Katherine A. Kelley State Public Health Laboratory","country":"USA","names":["Incekara,K.","Pearson,C.","Nguyen,T.","Perera,N."]},"updateDate":"2025-11-28T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX626541.1","bioprojects":["PRJNA777596"],"biosample":"SAMN53485153","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-12","name":"SARS-CoV-2/human/USA/CT-DPH-1333562001/2025"},"length":29706,"location":{"geographicLocation":"USA","geographicRegion":"North America"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"37D3DBE9"},"proteinCount":12,"releaseDate":"2025-11-28T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"CT State Public Health Laboratory Submission Group, Katherine A. Kelley State Public Health Laboratory","country":"USA","names":["Incekara,K.","Pearson,C.","Nguyen,T.","Perera,N."]},"updateDate":"2025-11-28T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX626542.1","bioprojects":["PRJNA777596"],"biosample":"SAMN53485154","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-09","name":"SARS-CoV-2/human/USA/CT-DPH-1333491001/2025"},"length":29718,"location":{"geographicLocation":"USA","geographicRegion":"North America"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"7669DC60"},"proteinCount":12,"releaseDate":"2025-11-28T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"CT State Public Health Laboratory Submission Group, Katherine A. Kelley State Public Health Laboratory","country":"USA","names":["Incekara,K.","Pearson,C.","Nguyen,T.","Perera,N."]},"updateDate":"2025-11-28T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX626546.1","bioprojects":["PRJNA777596"],"biosample":"SAMN53485158","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-14","name":"SARS-CoV-2/human/USA/CT-DPH-1334404001/2025"},"length":29715,"location":{"geographicLocation":"USA","geographicRegion":"North America"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"4AFED7E2"},"proteinCount":12,"releaseDate":"2025-11-28T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"CT State Public Health Laboratory Submission Group, Katherine A. Kelley State Public Health Laboratory","country":"USA","names":["Incekara,K.","Pearson,C.","Nguyen,T.","Perera,N."]},"updateDate":"2025-11-28T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632381.1","bioprojects":["PRJNA932344"],"biosample":"SAMN53515388","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-03","name":"SARS-CoV-2/human/USA/VT-25-008832-WGS-01/2025","source":"oronasopharynx"},"length":29703,"location":{"geographicLocation":"USA: Vermont","geographicRegion":"North America","usaState":"VT"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"715D4CC"},"proteinCount":12,"purposeOfSampling":"PURPOSE_OF_SAMPLING_BASELINE_SURVEILLANCE","releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University of Vermont, Bioinformatics Shared Resource","country":"USA","names":["Dragon,J.","Devlin,V."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX632468.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422234","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-09","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15644/2025"},"length":29796,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"5B01D4ED"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215912"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632471.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422271","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-15","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15647/2025"},"length":29794,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"4493D4E1"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215879"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.2","taxId":2697049}}
{"accession":"PX632472.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422288","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-15","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15648/2025"},"length":29796,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"653AD501"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215830"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632473.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422309","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-03","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15649/2025"},"length":29795,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"B874D4F0"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215861"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX632474.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422327","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-28","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15650/2025"},"length":29795,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"D804D4F1"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215841"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632475.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422239","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-09","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15651/2025"},"length":29795,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"4CB0D4EE"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215865"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX632476.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422241","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-09","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15652/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"42BDD50C"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215813"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"NB.1.8.1","taxId":2697049}}
{"accession":"PX632477.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422242","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-09","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15653/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"EF4DD4DA"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215856"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632478.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422251","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-10","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15654/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"F920D4D8"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215901"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632479.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422257","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-10","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15655/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"9A00D505"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215894"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"PQ.9","taxId":2697049}}
{"accession":"PX632480.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422266","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-15","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15656/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"14D6D4EE"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215884"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632481.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422268","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-15","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15657/2025"},"length":29795,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"4609D4E4"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215882"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.2","taxId":2697049}}
{"accession":"PX632483.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422273","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-15","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15659/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"C9D0D4FC"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215877"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX632484.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422275","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-09","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15660/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"7CF9D4E0"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215874"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"PQ.2","taxId":2697049}}
{"accession":"PX632485.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422278","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-15","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15661/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"5DE6D4DC"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215871"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX632486.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422282","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-14","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15662/2025"},"length":29794,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"909D510"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215867"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632487.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422285","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-13","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15663/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"FAF3D4E8"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215833"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.2","taxId":2697049}}
{"accession":"PX632488.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422289","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-13","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15664/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"28AED4E6"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215829"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.2","taxId":2697049}}
{"accession":"PX632489.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422302","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-04","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15665/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"E39D4F7"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215815"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632490.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422303","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-03","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15666/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"5A7CD4EB"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215814"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.2","taxId":2697049}}
{"accession":"PX632491.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422313","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-01","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15667/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"A7B4D4CC"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215857"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX632492.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422316","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-01","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15668/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"8268D4DA"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215853"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX632493.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422319","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-29","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15669/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"C967D4F2"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215850"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"PY.1","taxId":2697049}}
{"accession":"PX632494.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422330","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-28","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15670/2025"},"length":29794,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"7548D4DF"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215838"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"PQ.10","taxId":2697049}}
{"accession":"PX632495.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422332","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-30","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15671/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"AFF0D4B9"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215836"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX632496.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422236","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-08","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15672/2025"},"length":29789,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"CC24D4DD"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215898"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.2","taxId":2697049}}
{"accession":"PX632497.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422243","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-10","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15673/2025"},"length":29791,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"1DE5D4ED"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215845"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"PQ.2","taxId":2697049}}
{"accession":"PX632498.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422265","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-16","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15674/2025"},"length":29789,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"EFEDD4ED"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215885"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.2","taxId":2697049}}
{"accession":"PX632499.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422269","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-15","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15675/2025"},"length":29792,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"B076D4F5"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215881"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.2","taxId":2697049}}
{"accession":"PX632501.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422311","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-29","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15677/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"3908D4EE"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215859"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632502.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422321","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-05","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15678/2025"},"length":29791,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"C0A6D4D9"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215848"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632504.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422329","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-28","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15680/2025"},"length":29789,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"51E7D4CD"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215839"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.2","taxId":2697049}}
{"accession":"PX632505.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422331","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-29","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15681/2025"},"length":29789,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"E638D4ED"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215837"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.2","taxId":2697049}}
{"accession":"PX632506.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422237","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-09","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15682/2025"},"length":29790,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"7632D4CA"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215887"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"LF.7.6.2","taxId":2697049}}
{"accession":"PX632507.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422238","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-09","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15683/2025"},"length":29790,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"74F1D4FB"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215876"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX632509.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422263","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-10","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15685/2025"},"length":29787,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"E448D4C0"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215888"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX632510.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422277","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-16","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15686/2025"},"length":29787,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"3344D4C1"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215872"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.2","taxId":2697049}}
{"accession":"PX632511.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422315","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-31","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15687/2025"},"length":29787,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"CA92D4A5"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215854"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX632512.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422324","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-27","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15688/2025"},"length":29790,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"B46D4FB"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215844"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX632513.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422240","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-09","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15689/2025"},"length":29788,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"4E54D4D3"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215824"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.1","taxId":2697049}}
{"accession":"PX632514.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422254","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-06","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15690/2025"},"length":29787,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"91D8D4D5"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215897"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.2","taxId":2697049}}
{"accession":"PX632515.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422258","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-10","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15691/2025"},"length":29787,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"C900D4BE"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215893"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"LF.7","taxId":2697049}}
{"accession":"PX632516.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422259","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-10","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15692/2025"},"length":29787,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"16A8D4C0"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215892"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632517.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422260","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-10","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15693/2025"},"length":29786,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"E21D4D9"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215891"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"NB.1.8.1","taxId":2697049}}
{"accession":"PX632518.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422261","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-10","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15694/2025"},"length":29785,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"4F92D4CD"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215890"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632519.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422283","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-14","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15695/2025"},"length":29786,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"1AD6D4D1"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215866"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632520.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422290","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-13","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15696/2025"},"length":29787,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"DEA5D4C8"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215828"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3.1","taxId":2697049}}
{"accession":"PX632521.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422305","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-03","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15697/2025"},"length":29784,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"4EA9D4A8"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215811"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.1","taxId":2697049}}
{"accession":"PX632522.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422310","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-31","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15698/2025"},"length":29785,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"7E10D4C7"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215860"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.2","taxId":2697049}}
{"accession":"PX632523.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422312","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-31","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15699/2025"},"length":29787,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"E57DD4F0"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215858"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632524.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422318","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-27","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15700/2025"},"length":29785,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"40FAD4C6"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215851"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX632525.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422320","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-05","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15701/2025"},"length":29786,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"77EBD4CD"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215849"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632526.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422323","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-28","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15702/2025"},"length":29786,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"B453D4D4"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215846"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX632527.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422333","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-29","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15703/2025"},"length":29786,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"45AED4CD"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215835"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632528.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422249","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-10","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15704/2025"},"length":29783,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"AED9D49D"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215903"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632529.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422264","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-12","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15705/2025"},"length":29781,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"EC57D4AC"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215886"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.2","taxId":2697049}}
{"accession":"PX632530.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422280","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-09","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15706/2025"},"length":29784,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"B4D7D4CE"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215869"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"LP.8.1","taxId":2697049}}
{"accession":"PX632531.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422284","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-14","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15707/2025"},"length":29783,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"1303D4D9"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215834"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.2","taxId":2697049}}
{"accession":"PX632532.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422262","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-10","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15708/2025"},"length":29775,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"7E43D48C"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215889"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632534.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422317","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-27","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15710/2025"},"length":29786,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"EED6D67A"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215852"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632535.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422297","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-04","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15712/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"7C0ED7C0"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215820"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX632536.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422256","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-10","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15713/2025"},"length":29719,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"5104D3CE"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215895"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"NB.1.8.1","taxId":2697049}}
{"accession":"PX632537.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422272","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-15","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15714/2025"},"length":29719,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"C2D4D40C"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215878"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"PQ.14","taxId":2697049}}
{"accession":"PX632538.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422299","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-03","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15715/2025"},"length":29719,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"26ADD3CB"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215818"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX632539.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422292","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-02","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15716/2025"},"length":29706,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"F893D41A"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215826"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632540.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422267","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-15","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15717/2025"},"length":29706,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"52D7D359"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215883"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632541.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422328","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-25","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15718/2025"},"length":29700,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"7934D4E7"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215840"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX632542.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422304","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-04","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15719/2025"},"length":29793,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"379DDC14"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215812"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.2","taxId":2697049}}
{"accession":"PX632543.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422276","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-09","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15720/2025"},"length":29706,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"DDAD9A5"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215873"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XEC","taxId":2697049}}
{"accession":"PX632551.1","bioprojects":["PRJNA746690"],"biosample":"SAMN53422286","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-09-13","name":"SARS-CoV-2/human/USA/CA-LACPHL-AY15729/2025"},"length":29700,"location":{"geographicLocation":"USA: California","geographicRegion":"North America","usaState":"CA"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"2EEBE265"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","sraAccessions":["SRR36215832"],"submitter":{"affiliation":"Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories","country":"USA","names":["Fox,E.B.","Garrigues,J.M.","Green,N.M."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3.1","taxId":2697049}}
{"accession":"PX634570.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-22","name":"SARS-CoV-2/human/IRL/GIRL00076635/2025"},"length":29789,"location":{"geographicLocation":"Ireland: Dublin","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"C1F6D4B8"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX634571.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-20","name":"SARS-CoV-2/human/IRL/GIRL00076886/2025"},"length":29784,"location":{"geographicLocation":"Ireland: Kerry","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"2ED4D492"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"LF.7","taxId":2697049}}
{"accession":"PX634572.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-20","name":"SARS-CoV-2/human/IRL/GIRL00076985/2025"},"length":29761,"location":{"geographicLocation":"Ireland: Louth","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"CEABD44B"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX634573.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-23","name":"SARS-CoV-2/human/IRL/GIRL00076990/2025"},"length":29787,"location":{"geographicLocation":"Ireland: Dublin","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"BD9FD5BF"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX634574.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-23","name":"SARS-CoV-2/human/IRL/GIRL00077097/2025"},"length":29750,"location":{"geographicLocation":"Ireland: Dublin","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"4085D40A"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX634575.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-23","name":"SARS-CoV-2/human/IRL/GIRL00077311/2025"},"length":29833,"location":{"geographicLocation":"Ireland: Kildare","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"DC86D4EB"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX634576.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-23","name":"SARS-CoV-2/human/IRL/GIRL00077751/2025"},"length":29740,"location":{"geographicLocation":"Ireland: Kerry","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"47C3D656"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.2","taxId":2697049}}
{"accession":"PX634577.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-22","name":"SARS-CoV-2/human/IRL/GIRL00077788/2025"},"length":29750,"location":{"geographicLocation":"Ireland: Galway","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"E033D410"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX634578.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-23","name":"SARS-CoV-2/human/IRL/GIRL00078463/2025"},"length":29742,"location":{"geographicLocation":"Ireland: Sligo","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"4260D401"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX634580.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-29","name":"SARS-CoV-2/human/IRL/GIRL00078637/2025"},"length":29723,"location":{"geographicLocation":"Ireland: Cavan","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"8571D3A2"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX634581.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-29","name":"SARS-CoV-2/human/IRL/GIRL00078638/2025"},"length":29742,"location":{"geographicLocation":"Ireland: Cavan","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"3F30D3FB"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX634582.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-29","name":"SARS-CoV-2/human/IRL/GIRL00078640/2025"},"length":29831,"location":{"geographicLocation":"Ireland: Cavan","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"5CCAD4EE"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX634583.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-29","name":"SARS-CoV-2/human/IRL/GIRL00078641/2025"},"length":29742,"location":{"geographicLocation":"Ireland: Cavan","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"3F30D3FB"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX634584.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-29","name":"SARS-CoV-2/human/IRL/GIRL00078719/2025"},"length":29828,"location":{"geographicLocation":"Ireland: Cavan","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"A179D4E8"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX634585.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-28","name":"SARS-CoV-2/human/IRL/GIRL00078854/2025"},"length":29695,"location":{"geographicLocation":"Ireland: Tipperary","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"D5FAD35A"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG","taxId":2697049}}
{"accession":"PX634586.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-31","name":"SARS-CoV-2/human/IRL/GIRL00078960/2025"},"length":29808,"location":{"geographicLocation":"Ireland: Wicklow","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"A658D526"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX634587.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-30","name":"SARS-CoV-2/human/IRL/GIRL00079200/2025"},"length":29799,"location":{"geographicLocation":"Ireland: Cork","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"5CD5D4CF"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX634588.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-10-26","name":"SARS-CoV-2/human/IRL/GIRL00079206/2025"},"length":29740,"location":{"geographicLocation":"Ireland: Galway","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"B24AD3F5"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX634589.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-04","name":"SARS-CoV-2/human/IRL/GIRL00079696/2025"},"length":29824,"location":{"geographicLocation":"Ireland: Wicklow","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"97EED4DF"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3.1","taxId":2697049}}
{"accession":"PX634592.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-03","name":"SARS-CoV-2/human/IRL/GIRL00080052/2025"},"length":29742,"location":{"geographicLocation":"Ireland: Mayo","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"C0F5D3FC"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3.1","taxId":2697049}}
{"accession":"PX634593.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-05","name":"SARS-CoV-2/human/IRL/GIRL00080055/2025"},"length":29742,"location":{"geographicLocation":"Ireland: Dublin","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"2D0DD412"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX634594.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-06","name":"SARS-CoV-2/human/IRL/GIRL00080563/2025"},"length":29750,"location":{"geographicLocation":"Ireland: Dublin","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"6E1AD410"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX634598.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-06","name":"SARS-CoV-2/human/IRL/GIRL00081281/2025"},"length":29784,"location":{"geographicLocation":"Ireland: Cork","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"3335D4B0"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"LF.7","taxId":2697049}}
{"accession":"PX634599.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-09","name":"SARS-CoV-2/human/IRL/GIRL00081417/2025"},"length":29748,"location":{"geographicLocation":"Ireland: Dublin","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"D648D419"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
{"accession":"PX634602.1","completeness":"COMPLETE","geneCount":11,"host":{"lineage":[{"name":"cellular organisms","taxId":131567},{"name":"Eukaryota","taxId":2759},{"name":"Opisthokonta","taxId":33154},{"name":"Metazoa","taxId":33208},{"name":"Eumetazoa","taxId":6072},{"name":"Bilateria","taxId":33213},{"name":"Deuterostomia","taxId":33511},{"name":"Chordata","taxId":7711},{"name":"Craniata","taxId":89593},{"name":"Vertebrata","taxId":7742},{"name":"Gnathostomata","taxId":7776},{"name":"Teleostomi","taxId":117570},{"name":"Euteleostomi","taxId":117571},{"name":"Sarcopterygii","taxId":8287},{"name":"Dipnotetrapodomorpha","taxId":1338369},{"name":"Tetrapoda","taxId":32523},{"name":"Amniota","taxId":32524},{"name":"Mammalia","taxId":40674},{"name":"Theria","taxId":32525},{"name":"Eutheria","taxId":9347},{"name":"Boreoeutheria","taxId":1437010},{"name":"Euarchontoglires","taxId":314146},{"name":"Primates","taxId":9443},{"name":"Haplorrhini","taxId":376913},{"name":"Simiiformes","taxId":314293},{"name":"Catarrhini","taxId":9526},{"name":"Hominoidea","taxId":314295},{"name":"Hominidae","taxId":9604},{"name":"Homininae","taxId":207598},{"name":"Homo","taxId":9605},{"name":"Homo sapiens","taxId":9606}],"organismName":"Homo sapiens","taxId":9606},"isAnnotated":true,"isolate":{"collectionDate":"2025-11-12","name":"SARS-CoV-2/human/IRL/GIRL00082002/2025"},"length":29830,"location":{"geographicLocation":"Ireland: Galway","geographicRegion":"Europe"},"maturePeptideCount":26,"nucleotide":{"sequenceHash":"4401D4F9"},"proteinCount":12,"releaseDate":"2025-12-01T00:00:00Z","sourceDatabase":"GenBank","submitter":{"affiliation":"University College Dublin, UCD, National Virus Reference Laboratory","country":"Ireland","names":["Fahey,L.","Carr,M.","Dean,J.","Morley,U.","Hare,D.","De Gascun,C.F.","Rice,A.","Crowley,A."]},"updateDate":"2025-12-01T00:00:00Z","virus":{"lineage":[{"name":"Viruses","taxId":10239},{"name":"Riboviria","taxId":2559587},{"name":"Orthornavirae","taxId":2732396},{"name":"Pisuviricota","taxId":2732408},{"name":"Pisoniviricetes","taxId":2732506},{"name":"Nidovirales","taxId":76804},{"name":"Cornidovirineae","taxId":2499399},{"name":"Coronaviridae","taxId":11118},{"name":"Orthocoronavirinae","taxId":2501931},{"name":"Betacoronavirus","taxId":694002},{"name":"Sarbecovirus","taxId":2509511},{"name":"Betacoronavirus pandemicum","taxId":3418604},{"name":"Severe acute respiratory syndrome coronavirus 2","taxId":2697049}],"organismName":"Severe acute respiratory syndrome coronavirus 2","pangolinClassification":"XFG.3","taxId":2697049}}
