ID	Species	ncRNA	ncRNA type	Environmental factor (EF)	Phenotype	Sample	Condition of EF	Evidence	PubMed ID
1	Aedes aegypti mosquitoe	aae-miR-286b	miRNA	zika virus (ZIKV)	Zika virus (ZIKV) infection	Aedes aegypti	infect with ZIKV treatment	dysregulated	28715413
2	Aedes aegypti mosquitoe	aae-miR-2940	miRNA	wolbachia	wolbachia infection	aedes aegypti mosquitoes	wolbachia-infected treatment	upregulated	25158106
3	Aedes aegypti mosquitoe	aae-miR-2941	miRNA	zika virus (ZIKV)	Zika virus (ZIKV) infection	Aedes aegypti	infect with ZIKV treatment	dysregulated	28715413
4	Aedes aegypti mosquitoe	aae-miR-308	miRNA	zika virus (ZIKV)	Zika virus (ZIKV) infection	Aedes aegypti	infect with ZIKV treatment	dysregulated	28715413
5	Aedes aegypti mosquitoe	aae-miR-309a	miRNA	zika virus (ZIKV)	Zika virus (ZIKV) infection	Aedes aegypti	infect with ZIKV treatment	dysregulated	28715413
6	Aedes aegypti mosquitoe	aae-miR-989	miRNA	zika virus (ZIKV)	Zika virus (ZIKV) infection	Aedes aegypti	infect with ZIKV treatment	dysregulated	28715413
7	Anopheles anthropophagus	aan-miR-275	miRNA	plasmodium	plasmodium infection	anopheles anthropophagus midgut	plasmodium treatment	downregulated in midgut	28209211
8	Anopheles anthropophagus	aan-miR-92a	miRNA	plasmodium	plasmodium infection	anopheles anthropophagus midgut	plasmodium treatment	upregulated in midgut	28209211
9	Anopheles gambiae	aga-miR-133	miRNA	rodent malaria parasite Plasmodium berghei	expression regulation	de novo A. gambiae	infect with rodent malaria parasite Plasmodium berghei treatment	upregulated	24997592
10	Anopheles gambiae	aga-miR-1891	miRNA	rodent malaria parasite Plasmodium berghei	expression regulation	de novo A. gambiae	infect with rodent malaria parasite Plasmodium berghei treatment	upregulated	24997592
11	Anopheles gambiae	aga-miR-278	miRNA	rodent malaria parasite Plasmodium berghei	expression regulation	de novo A. gambiae	infect with rodent malaria parasite Plasmodium berghei treatment	upregulated	24997592
12	Anopheles gambiae	aga-miR-281	miRNA	rodent malaria parasite Plasmodium berghei	expression regulation	de novo A. gambiae	infect with rodent malaria parasite Plasmodium berghei treatment	upregulated	24997592
13	Anopheles gambiae	aga-miR-305	miRNA	P. falciparum	anti-Plasmodium response	mosquito	P. falciparum infected treatment	upregulated	25445902
14	Anopheles gambiae	aga-miR-929	miRNA	rodent malaria parasite Plasmodium berghei	expression regulation	de novo A. gambiae	infect with rodent malaria parasite Plasmodium berghei treatment	upregulated	24997592
15	Anopheles gambiae	aga-miR-965	miRNA	rodent malaria parasite Plasmodium berghei	expression regulation	de novo A. gambiae	infect with rodent malaria parasite Plasmodium berghei treatment	upregulated	24997592
16	Anopheles gambiae	aga-miR-989	miRNA	P. falciparum	anti-Plasmodium response	mosquito	P. falciparum infected treatment	upregulated	25445902
17	Apostichopus japonicus	spu-miR-137	miRNA	lipopolysaccharide (LPS)	apoptosis	sea cucumber primary cell	1 mg mL-1 of LPS from Escherichia coli	downregulated	27832949
18	Apostichopus japonicus	spu-miR-138	miRNA	vibrio splendidus	apoptosis	healthy adult sea cucumber Apostichopus japonicus	infect with Vibrio splendiduss treatment	downregulated	27832949
19	Apple	mdm-miR156a	miRNA	light	anthocyanin biosynthetic	apple peels from the 'Red Fuji' cultivar	light treatment	dysregulated	31344284
20	Arabidopsis thaliana	ath-miR156	miRNA	salt and drought stress	adaptation to the environment	Arabidopsis	under stress conditions treatment	upregulated	25345491
21	Arabidopsis thaliana	ath-miR156	miRNA	recurring heat stress (HS memory)	heat stress	arabidopsis thaliana	HS treatment	upregulated	24769482
22	Arabidopsis thaliana	ath-miR156a	miRNA	glucose	extended juvenile development	Arabidopsis seedlings	MS medium containing 10 mM Glucose	downregulated	28108181
23	Arabidopsis thaliana	ath-miR156a	miRNA	sugar	vegetative phase change	Arabidopsis thaliana	Sugar?treatment treatment	downregulated	23538384
24	Arabidopsis thaliana	ath-miR156c	miRNA	glucose	extended juvenile development	Arabidopsis seedlings	MS medium containing 10 mM Glucose	downregulated	28108181
25	Arabidopsis thaliana	ath-miR156c	miRNA	sugar	vegetative phase change	Arabidopsis thaliana	Sugar?treatment treatment	downregulated	23538384
26	Arabidopsis thaliana	ath-miR156h	miRNA	root knot nematodes (RKN)	root-knot nematodes (RKNs) infection	Arabidopsis root	RKN treatment	strong activity within galls	28906559
27	Arabidopsis thaliana	ath-miR160	miRNA	sulfur dioxide (SO2)	botrytis cinerea (B. cinerea) infection	arabidopsis plants	sulfur dioxide (SO2) treatment	upregulated	28917191
28	Arabidopsis thaliana	ath-miR163	miRNA	root knot nematodes (RKN)	root-knot nematodes (RKNs) infection	Arabidopsis root	RKN treatment	strong activity within galls	28906559
29	Arabidopsis thaliana	ath-MIR165a	miRNA	abscisic acid (ABA)	xylem patterning and maturation	Arabidopsis protoxylem (PX)	abscisic acid (ABA) treatment	upregulated	31399468
30	Arabidopsis thaliana	ath-MIR166b	miRNA	abscisic acid (ABA)	xylem patterning and maturation	Arabidopsis protoxylem (PX)	abscisic acid (ABA) treatment	upregulated	31399468
31	Arabidopsis thaliana	ath-miR167	miRNA	sulfur dioxide (SO2)	botrytis cinerea (B. cinerea) infection	arabidopsis plants	sulfur dioxide (SO2) treatment	upregulated	28917191
32	Arabidopsis thaliana	ath-miR2111a-3p	miRNA	root knot nematodes (RKN)	root-knot nematodes (RKNs) infection	Arabidopsis root	RKN treatment	strong activity within galls	28906559
33	Arabidopsis thaliana	ath-miR393	miRNA	salt	acclimation to salinity	arabidopsis thaliana seeds	culture at salt (ATS) medium treatment	upregulated	25222737
34	Arabidopsis thaliana	ath-miR393	miRNA	sulfur dioxide (SO2)	botrytis cinerea (B. cinerea) infection	arabidopsis plants	sulfur dioxide (SO2) treatment	upregulated	28917191
35	Arabidopsis thaliana	ath-miR395	miRNA	sulfur dioxide (SO2)	sulfur dioxide (SO2) stress and oxidative stress	Arabidopsis shoots	SO2 treatment	downregulated(miR-398) and upregulated (miR-395)	28819808
36	Arabidopsis thaliana	ath-miR396	miRNA	ultraviolet (UV) irradiation	cell proliferation	proliferating tissues	UV-B radiation treatment	upregulated	24076976
37	Arabidopsis thaliana	ath-MIR398	miRNA	boron	boron toxicity	Arabidopsis thaliana seedlings	boron treatment	upregulated	27794275
38	Arabidopsis thaliana	ath-miR398	miRNA	sulfur dioxide (SO2)	sulfur dioxide (SO2) stress and oxidative stress	Arabidopsis shoots	SO2 treatment	downregulated(miR-398) and upregulated (miR-395)	28819808
39	Arabidopsis thaliana	ath-miR414c	miRNA	Salinity	plant salinity tolerance	Arabidopsis	Salinity stress induce treatment	downregulated	30676211
40	Arabidopsis thaliana	ath-miR5090	miRNA	duplication of AOP2	nitrogen starvation	Arabidopsis thaliana	duplication of AOP2 treatment	upregulated	24367020
41	Arabidopsis thaliana	ath-miR826	miRNA	duplication of AOP2	nitrogen starvation	Arabidopsis thaliana	duplication of AOP2 treatment	upregulated	24367020
42	Arabidopsis thaliana	ath-miR831	miRNA	root knot nematodes (RKN)	root-knot nematodes (RKNs) infection	Arabidopsis root	RKN treatment	strong activity within galls	28906559
43	Arabidopsis thaliana	ath-miR861-5p	miRNA	root knot nematodes (RKN)	root-knot nematodes (RKNs) infection	Arabidopsis root	RKN treatment	strong activity within galls	28906559
44	Asian tiger mosquito	aal-miR-252	miRNA	dengue virus serotype 2 (DENV-2)	dengue virus (DENV) infection	Ae. albopictus C6/36 cellline	wih dengue virus serotype 2 (DENV-2) infection treatment	upregulated	25025105
45	Atlantic cod	gmo-miR-128-3-5p	miRNA	polyinosinic-polycytidilic acid (Poly(I:C))	antiviral immune response	Atlantic cod (Gadus morhua) macrophages	poly (I:C) treatment	upregulated	29190475
46	Atlantic cod	gmo-miR-199-1-3p	miRNA	polyinosinic-polycytidilic acid (Poly(I:C))	antiviral immune response	Atlantic cod (Gadus morhua) macrophages	poly (I:C) treatment	downregulated	29190475
47	Atlantic cod	gmo-miR-214-1-5p	miRNA	polyinosinic-polycytidilic acid (Poly(I:C))	antiviral immune response	Atlantic cod (Gadus morhua) macrophages	poly (I:C) treatment	upregulated	29190475
48	Atlantic cod	gmo-miR-30b-3p	miRNA	polyinosinic-polycytidilic acid (Poly(I:C))	antiviral immune response	Atlantic cod (Gadus morhua) macrophages	poly (I:C) treatment	downregulated	29190475
49	Atlantic cod	gmo-miR-451-3p	miRNA	polyinosinic-polycytidilic acid (Poly(I:C))	antiviral immune response	Atlantic cod (Gadus morhua) macrophages	poly (I:C) treatment	upregulated	29190475
50	Baboon	pan-miR-124	miRNA	¦Ã-rays	hematological acute radiation syndrome (HARS)	baboons peripheral blood on day 1 after exposure	irradiated with 2.5 or 5 Gy	upregulated in the peripheral blood on day 1 after exposure	28236054
51	Baboon	pan-miR-150-5p	miRNA	simvastatin	endometriosis	serum	simvastatin treatment	downregulated	29587611
52	Baboon	pan-miR-29c	miRNA	¦Ã-rays	hematological acute radiation syndrome (HARS)	baboons peripheral blood on day 1 after exposure	irradiated with 2.5 or 5 Gy	upregulated in the peripheral blood on day 1 after exposure	28236054
53	Baboon	pan-miR-3613-5p	miRNA	simvastatin	endometriosis	serum	simvastatin treatment	upregulated	29587611
54	Baboon	pan-miR-378	miRNA	¦Ã-rays	hematological acute radiation syndrome (HARS)	baboons peripheral blood on day 1 after exposure	irradiated with 2.5 or 5 Gy	upregulated in the peripheral blood on day 1 after exposure	28236054
55	Baboon	pan-miR-451a	miRNA	simvastatin	endometriosis	serum	simvastatin treatment	downregulated	29587611
56	Baboon	pan-miR-574-3p	miRNA	¦Ã-rays	hematological acute radiation syndrome (HARS)	baboons peripheral blood on day 1 after exposure	irradiated with 2.5 or 5 Gy	upregulated in the peripheral blood on day 1 after exposure	28236054
57	Baboon	pan-miR-7	miRNA	¦Ã-rays	hematological acute radiation syndrome (HARS)	baboons peripheral blood on day 1 after exposure	irradiated with 2.5 or 5 Gy	upregulated in the peripheral blood on day 1 after exposure	28236054
58	Barley	Hv-miR1432	miRNA	drought	abiotic stress response	barley	drought treatments	dysregulated	27155357
59	Barley	Hv-mir160a	miRNA	heat stress	heat-responsive	barley	high temperature treatment	upregulated	25183744
60	Barley	Hv-mir166a	miRNA	heat stress	heat-responsive	barley	high temperature treatment	upregulated	25183744
61	Barley	Hv-miR166b	miRNA	drought	abiotic stress response	barley	drought treatments	dysregulated	27155357
62	Barley	Hv-miR166b	miRNA	aluminum (Al)	aluminum (Al) toxicity	barley	Al treatment	downregulated	32588054
63	Barley	Hv-miR166c	miRNA	drought	abiotic stress response	barley	drought treatments	dysregulated	27155357
64	Barley	Hv-mir167h	miRNA	heat stress	heat-responsive	barley	high temperature treatment	upregulated	25183744
65	Barley	Hv-miR169b	miRNA	drought	abiotic stress response	barley	drought treatments	dysregulated	27155357
66	Barley	Hv-mir5175a	miRNA	heat stress	heat-responsive	barley	high temperature treatment	upregulated	25183744
67	Barley	Hv-miRx5	miRNA	drought	abiotic stress response	barley	drought treatments	dysregulated	27155357
68	Bombus terrestris	bte-miR-100	miRNA	"slow bee paralysis virus (SBPV), Israeli acute paralysis virus (IAPV)"	bee-virus interaction	bumblebee	"SBPV,IAPV treatment"	dysregulated	28374846
69	Bombus terrestris	bte-miR-281	miRNA	"slow bee paralysis virus (SBPV), Israeli acute paralysis virus (IAPV)"	bee-virus interaction	bumblebee	"SBPV,IAPV treatment"	dysregulated	28374846
70	Bombus terrestris	bte-miR-34	miRNA	"slow bee paralysis virus (SBPV), Israeli acute paralysis virus (IAPV)"	bee-virus interaction	bumblebee	"SBPV,IAPV treatment"	dysregulated	28374846
71	Bombus terrestris	bte-miR-87	miRNA	"slow bee paralysis virus (SBPV), Israeli acute paralysis virus (IAPV)"	bee-virus interaction	bumblebee	"SBPV,IAPV treatment"	dysregulated	28374846
72	Branchiostoma belcheri	bbe-miR-10b-5p	miRNA	lipopolysaccharide (LPS)	innate immune response	gills of amphioxus Branchiostoma belcheri	lipopolysaccharide (LPS) treatment	upregulated	28069432
73	Branchiostoma belcheri	bbe-miR-10c-5p	miRNA	lipopolysaccharide (LPS)	innate immune response	gills of amphioxus Branchiostoma belcheri	lipopolysaccharide (LPS) treatment	downregulated	28069432
74	Branchiostoma belcheri	bbe-miR-125a-3p	miRNA	lipopolysaccharide (LPS)	innate immune response	gills of amphioxus Branchiostoma belcheri	lipopolysaccharide (LPS) treatment	upregulated	28069432
75	Branchiostoma belcheri	bbe-miR-190-3p	miRNA	lipopolysaccharide (LPS)	innate immune response	gills of amphioxus Branchiostoma belcheri	lipopolysaccharide (LPS) treatment	downregulated	28069432
76	Branchiostoma belcheri	bbe-miR-2063-3p	miRNA	lipopolysaccharide (LPS)	innate immune response	gills of amphioxus Branchiostoma belcheri	lipopolysaccharide (LPS) treatment	downregulated	28069432
77	Branchiostoma belcheri	bbe-miR-29a-3p	miRNA	lipopolysaccharide (LPS)	innate immune response	gills of amphioxus Branchiostoma belcheri	lipopolysaccharide (LPS) treatment	upregulated	28069432
78	Branchiostoma belcheri	bbe-miR-31-5p	miRNA	lipopolysaccharide (LPS)	innate immune response	gills of amphioxus Branchiostoma belcheri	lipopolysaccharide (LPS) treatment	upregulated	28069432
79	Branchiostoma belcheri	bbe-miR-33-5p	miRNA	lipopolysaccharide (LPS)	innate immune response	gills of amphioxus Branchiostoma belcheri	lipopolysaccharide (LPS) treatment	downregulated	28069432
80	Branchiostoma belcheri	bbe-miR-34a-5p	miRNA	lipopolysaccharide (LPS)	innate immune response	gills of amphioxus Branchiostoma belcheri	lipopolysaccharide (LPS) treatment	downregulated	28069432
81	Branchiostoma belcheri	bbe-miR-34b-5p	miRNA	lipopolysaccharide (LPS)	innate immune response	gills of amphioxus Branchiostoma belcheri	lipopolysaccharide (LPS) treatment	upregulated	28069432
82	Branchiostoma belcheri	bbe-miR-4866-3p	miRNA	lipopolysaccharide (LPS)	innate immune response	gills of amphioxus Branchiostoma belcheri	lipopolysaccharide (LPS) treatment	upregulated	28069432
83	Branchiostoma belcheri	bbe-miR-4874-3p	miRNA	lipopolysaccharide (LPS)	innate immune response	gills of amphioxus Branchiostoma belcheri	lipopolysaccharide (LPS) treatment	upregulated	28069432
84	Branchiostoma belcheri	bbe-miR-4877-3p	miRNA	lipopolysaccharide (LPS)	innate immune response	gills of amphioxus Branchiostoma belcheri	lipopolysaccharide (LPS) treatment	downregulated	28069432
85	Branchiostoma belcheri	bbe-miR-92a-3p	miRNA	lipopolysaccharide (LPS)	innate immune response	gills of amphioxus Branchiostoma belcheri	lipopolysaccharide (LPS) treatment	upregulated	28069432
86	Branchiostoma belcheri	bbe-miR-92b-3p	miRNA	lipopolysaccharide (LPS)	innate immune response	gills of amphioxus Branchiostoma belcheri	lipopolysaccharide (LPS) treatment	upregulated	28069432
87	Branchiostoma belcheri	bbe-miR-92c-3p	miRNA	lipopolysaccharide (LPS)	innate immune response	gills of amphioxus Branchiostoma belcheri	lipopolysaccharide (LPS) treatment	upregulated	28069432
88	Branchiostoma belcheri	bbe-miR-92d-3p	miRNA	lipopolysaccharide (LPS)	innate immune response	gills of amphioxus Branchiostoma belcheri	lipopolysaccharide (LPS) treatment	downregulated	28069432
89	Bread wheat	tae-miR10004	miRNA	low temperature	cold stress	seeds of common wheat cultivar JM22	germinated and grown in a 4 ¡ãC chamber for vernalization	upregulated	28241738
90	Bread wheat	tae-miR10008	miRNA	low temperature	cold stress	seeds of common wheat cultivar JM22	germinated and grown in a 4 ¡ãC chamber for vernalization	upregulated	28241738
91	Bread wheat	tae-miR10009	miRNA	low temperature	cold stress	seeds of common wheat cultivar JM22	germinated and grown in a 4 ¡ãC chamber for vernalization	upregulated	28241738
92	Bread wheat	tae-miR1130c	miRNA	low temperature	cold stress	seeds of common wheat cultivar JM22	germinated and grown in a 4 ¡ãC chamber for vernalization	upregulated	28241738
93	Bread wheat	tae-miR156	miRNA	low temperature	cold stress	seeds of common wheat cultivar JM22	germinated and grown in a 4 ¡ãC chamber for vernalization	downregulated	28241738
94	Bread wheat	tae-miR159	miRNA	drought	crop growth	leaf and root	drought treatments	dysregulated	26141043
95	Bread wheat	tae-miR159a	miRNA	low temperature	cold stress	seeds of common wheat cultivar JM22	germinated and grown in a 4 ¡ãC chamber for vernalization	upregulated	28241738
96	Bread wheat	tae-miR160	miRNA	drought	crop growth	leaf and root	drought treatments	dysregulated	26141043
97	Bread wheat	tae-miR160b	miRNA	low temperature	cold stress	seeds of common wheat cultivar JM22	germinated and grown in a 4 ¡ãC chamber for vernalization	upregulated	28241738
98	Bread wheat	tae-miR165a	miRNA	low temperature	cold stress	seeds of common wheat cultivar JM22	germinated and grown in a 4 ¡ãC chamber for vernalization	upregulated	28241738
99	Bread wheat	tae-miR166	miRNA	drought	crop growth	leaf and root	drought treatments	dysregulated	26141043
100	Bread wheat	tae-miR167	miRNA	angiostrongylus cantonensis (A. cantonensis)	rhizobium infection	wheat between shoots and roots	angiostrongylus cantonensis (A. cantonensis) infection	upregulated	27858182
101	Bread wheat	tae-miR169	miRNA	low temperature	cold stress	seeds of common wheat cultivar JM22	germinated and grown in a 4 ¡ãC chamber for vernalization	downregulated	28241738
102	Bread wheat	tae-miR169	miRNA	drought	crop growth	leaf and root	drought treatments	dysregulated	26141043
103	Bread wheat	tae-miR171	miRNA	angiostrongylus cantonensis (A. cantonensis)	rhizobium infection	wheat between shoots and roots	angiostrongylus cantonensis (A. cantonensis) infection	upregulated	27858182
104	Bread wheat	tae-miR171a	miRNA	low temperature	cold stress	seeds of common wheat cultivar JM22	germinated and grown in a 4 ¡ãC chamber for vernalization	downregulated	28241738
105	Bread wheat	tae-miR171c	miRNA	low temperature	cold stress	seeds of common wheat cultivar JM22	germinated and grown in a 4 ¡ãC chamber for vernalization	upregulated	28241738
106	Bread wheat	tae-miR172	miRNA	drought	crop growth	leaf and root	drought treatments	dysregulated	26141043
107	Bread wheat	tae-miR1858	miRNA	drought	crop growth	leaf and root	drought treatments	dysregulated	26141043
108	Bread wheat	tae-miR2118	miRNA	drought	crop growth	leaf and root	drought treatments	dysregulated	26141043
109	Bread wheat	tae-miR2118a	miRNA	low temperature	cold stress	seeds of common wheat cultivar JM22	germinated and grown in a 4 ¡ãC chamber for vernalization	upregulated	28241738
110	Bread wheat	tae-miR319a	miRNA	low temperature	cold stress	seeds of common wheat cultivar JM22	germinated and grown in a 4 ¡ãC chamber for vernalization	upregulated	28241738
111	Bread wheat	tae-miR393	miRNA	angiostrongylus cantonensis (A. cantonensis)	rhizobium infection	wheat between shoots and roots	angiostrongylus cantonensis (A. cantonensis) infection	upregulated	27858182
112	Bread wheat	tae-miR395	miRNA	drought	crop growth	leaf and root	drought treatments	dysregulated	26141043
113	Bread wheat	tae-miR396	miRNA	drought	crop growth	leaf and root	drought treatments	dysregulated	26141043
114	Bread wheat	tae-miR408	miRNA	drought	crop growth	leaf and root	drought treatments	dysregulated	26141043
115	Bread wheat	tae-miR444c	miRNA	low temperature	cold stress	seeds of common wheat cultivar JM22	germinated and grown in a 4 ¡ãC chamber for vernalization	downregulated	28241738
116	Bread wheat	tae-miR472	miRNA	drought	crop growth	leaf and root	drought treatments	dysregulated	26141043
117	Bread wheat	tae-miR477	miRNA	drought	crop growth	leaf and root	drought treatments	dysregulated	26141043
118	Bread wheat	tae-miR482	miRNA	drought	crop growth	leaf and root	drought treatments	dysregulated	26141043
119	Bread wheat	tae-miR5048a	miRNA	low temperature	cold stress	seeds of common wheat cultivar JM22	germinated and grown in a 4 ¡ãC chamber for vernalization	downregulated	28241738
120	Bread wheat	tae-miR5049	miRNA	drought	crop growth	leaf and root	drought treatments	dysregulated	26141043
121	Bread wheat	tae-miR827	miRNA	low temperature	cold stress	seeds of common wheat cultivar JM22	germinated and grown in a 4 ¡ãC chamber for vernalization	downregulated	28241738
122	Caenorhabditis elegans	cel-miR-124	miRNA	polysaccharide (APS)	longevity	Caenorhabditis elegans	polysaccharide (APS) treatment	upregulated	25186652
123	Caenorhabditis elegans	cel-miR-228	miRNA	dietary restriction (DR)	prolong longevity	OP50 E. coli	Dietary restriction (DR) induce	upregulated	25242029
124	Caenorhabditis elegans	cel-miR-235	miRNA	dietary restriction (DR)	dietary restriction (DR)-induced longevity in Caenorhabditis elegans	Caenorhabditis elegans	Dietary restriction (DR) induce	upregulated	30872315
125	Caenorhabditis elegans	cel-mir-237	miRNA	¦Ã-rays	enhance radiation sensitivity	Caenorhabditis elegans	¦Ã-irradiation treatment	downregulated	27321180
126	Caenorhabditis elegans	cel-mir-237	miRNA	ionizing radiation (IR)	ionizing radiation (IR) injury	vulval cell	ionizing radiation (IR) treatment	downregulated	27321180
127	Caenorhabditis elegans	cel-miR-34-5p	miRNA	enoxacin	aging	Caenorhabditis elegans	enoxacin treatment	Enoxacin treatment downregulated miR-34-5p.	29986212
128	Caenorhabditis elegans	cel-miR-35	miRNA	multiwalled carbon nanotubes (MWCNT)	multi-walled carbon nanotubes (MWCNTs) toxicity	intestine	multi-walled carbon nanotubes (MWCNTs) exposure	upregulated	31434956
129	Caenorhabditis elegans	cel-miR-67	miRNA	P. aeruginosa PA14	P. aeruginosa PA14 infection	worms	Exposure to P. aeruginosa PA14 treatment	upregulated	29050943
130	Caenorhabditis elegans	cel-miR-71	miRNA	dietary restriction (DR)	prolong longevity	OP50 E. coli	Dietary restriction (DR) induce	upregulated	25242029
131	Cat	fca-miR-101	miRNA	feline herpesvirus 1 (FHV-1)	feline herpesvirus 1 (FHV-1) infection	F81 cells	feline herpesvirus 1 (FHV-1) infection	FHV-1 infection upregulated the expression level of miR-101 in a cGAS-dependent manner.	32456815
132	Cattle	bta-miR-106a	miRNA	TGF-¦Â1	cell proliferation	bovine granulosa cells	TGF-¦Â1 treatment	upregulated	29665451
133	Cattle	bta-miR-106a	miRNA	interferon tau (IFNT)	IFNT effect on endometrium	bovine endometrial cells	interferon tau (IFNT) treatment	upregulated	27091464
134	Cattle	bta-miR-125b	miRNA	escherichia coli lipopolysaccharides and staphylococcus aureus enterotoxin B	inflammatory response	CD14(+) bovine monocytes	Escherichia coli lipopolysaccharides and Staphylococcus aureus enterotoxin B treatment	downregulated	22033210
135	Cattle	bta-miR-1434-5p	miRNA	TGF-¦Â1	cell proliferation	bovine granulosa cells	TGF-¦Â1 treatment	upregulated	29665451
136	Cattle	bta-miR-146a	miRNA	quercetin	bovine mastitis	bovine neutrophil	quercetin treatment	downregulated	28507412
137	Cattle	bta-miR-146a	miRNA	escherichia coli lipopolysaccharides and staphylococcus aureus enterotoxin B	inflammatory response	CD14(+) bovine monocytes	Escherichia coli lipopolysaccharides and Staphylococcus aureus enterotoxin B treatment	downregulated	22033210
138	Cattle	bta-miR-146a	miRNA	lipopolysaccharide (LPS)	smooth muscle cell differentiation	CD14(+) bovine monocytes	lipopolysaccharide (LPS) treatment	upregulated	22033210
139	Cattle	bta-miR-148a	miRNA	lipopolysaccharide (LPS)	endometriosis	primary bovine endometrial epithelial cells (bEECs)	lipopolysaccharide (LPS) treatment	upregulated	31756048
140	Cattle	bta-miR-148b	miRNA	IFN-¦Ó	innate immune response	primary bovine endometrial epithelial cells (bEECs) and an endometrial epithelial cell line (BEND)	IFN-¦Ó treatment	downregulated	29456541
141	Cattle	bta-miR-152	miRNA	IFN-¦Ó	innate immune response	primary bovine endometrial epithelial cells (bEECs) and an endometrial epithelial cell line (BEND)	IFN-¦Ó treatment	downregulated	29456541
142	Cattle	bta-miR-155	miRNA	escherichia coli lipopolysaccharides and staphylococcus aureus enterotoxin B	inflammatory response	CD14(+) bovine monocytes	Escherichia coli lipopolysaccharides and Staphylococcus aureus enterotoxin B treatment	downregulated	22033210
143	Cattle	bta-miR-155	miRNA	lipopolysaccharide (LPS)	smooth muscle cell differentiation	CD14(+) bovine monocytes	LPS treatment	upregulated	22033210
144	Cattle	bta-miR-15a	miRNA	trichostatin A (TSA)	cell cycle arrest	Bovine donor cells	50 nM TSA-ed cells were synchronized at G0/G1 stage treatment	upregulated	25151601
145	Cattle	bta-miR-16	miRNA	trichostatin A (TSA)	cell cycle arrest	Bovine donor cells	50 nM TSA-ed cells were synchronized at G0/G1 stage treatment	upregulated	25151601
146	Cattle	bta-miR-181c	miRNA	quercetin	bovine mastitis	bovine neutrophil	quercetin treatment	downregulated	28507412
147	Cattle	bta-miR-183	miRNA	lipopolysaccharide (LPS)	inflammation	bovine endometrial cells	treated with 1 ¦Ìg/mL LPS for 24 h	upregulated	29191705
148	Cattle	bta-miR-19a	miRNA	lipopolysaccharide (LPS)	endometriosis	bovine endometrial epithelial cells (bEECs)	lipopolysaccharide (LPS) treatment	downregulated	30673803
149	Cattle	bta-miR-20a	miRNA	lipopolysaccharide (LPS)	inflammation	bovine endometrial cells	treated with 1 ¦Ìg/mL LPS for 24 h	downregulated	29191705
150	Cattle	bta-miR-221	miRNA	TGF-¦Â1	corpus luteum regression	bovine luteal endothelial cells (LECs)	transforming growth factor (TGF)¦Â1 treatment	downregulated	29228113
151	Cattle	bta-miR-221	miRNA	fibroblast growth factor 2 (FGF2)	corpus luteum regression	bovine luteal endothelial cells (LECs)	fibroblast growth factor-2 (FGF2) treatment	upregulated	29228113
152	Cattle	bta-miR-223	miRNA	Staphylococcus aureus	bovine mastitis	mastitic udder tissues	(Staphylococcus aureus) S. aureus infection treatment	upregulated	33195489
153	Cattle	bta-miR-223	miRNA	escherichia coli lipopolysaccharides and staphylococcus aureus enterotoxin B	inflammatory response	CD14(+) bovine monocytes	Escherichia coli lipopolysaccharides and Staphylococcus aureus enterotoxin B treatment	downregulated	22033210
154	Cattle	bta-miR-24-2	miRNA	quercetin	bovine mastitis	bovine neutrophil	quercetin treatment	downregulated	28507412
155	Cattle	bta-miR-26b	miRNA	lipopolysaccharide (LPS)	inflammatory response	bovine alveolar macrophages (bAMs)	lipopolysaccharide (LPS) treatment	upregulated	26503952
156	Cattle	bta-miR-34a	miRNA	trichostatin A (TSA)	cell cycle arrest	Bovine donor cells	50 nM TSA-ed cells were synchronized at G0/G1 stage treatment	upregulated	25151601
157	Cattle	bta-miR-365-3p	miRNA	lipopolysaccharide (LPS)	inflammation	bovine endometrial cells	treated with 1 ¦Ìg/mL LPS for 24 h	downregulated	29191705
158	Cattle	bta-miR-375	miRNA	lipopolysaccharide (LPS)	inflammation	bovine endometrial cells	treated with 1 ¦Ìg/mL LPS for 24 h	upregulated	29191705
159	Cattle	bta-miR-448	miRNA	lipopolysaccharide (LPS)	endometriosis	"Bovine endometrial epithelial cell line (bEECs, BEND cells)"	lipopolysaccharides (LPS) treatment	downregulated	31674024
160	Cattle	bta-miR-449b	miRNA	doxycycline	apoptosis	bovine fetal fibroblasts	doxycycline (DXC) treatment	upregulated	29042680
161	Cattle	bta-miR-9	miRNA	escherichia coli lipopolysaccharides and staphylococcus aureus enterotoxin B	inflammatory response	CD14(+) bovine monocytes	Escherichia coli lipopolysaccharides and Staphylococcus aureus enterotoxin B treatment	downregulated	22033210
162	Cattle	bta-miR-98	miRNA	caprine parainfluenza virus type 3 (CPIV3)	viral replication	Madin-Darby bovine kidney (MDBK) cells	caprine parainfluenza virus type 3 (CPIV3) infection	Bta-miR-98 Suppresses Replication of Caprine Parainfluenza Virus Type 3 Through Inhibiting Apoptosis by Targeting Caspase-3	32983081
163	Cattle	bta-miR-35a	miRNA	either toxic or non-toxic fescue seed diets	fescue toxicosis	Angus bulls sperm	s of either toxic or non-toxic fescue seed diets treatment	upregulated	25462855
164	Cattle	bta-miR-36a	miRNA	either toxic or non-toxic fescue seed diets	fescue toxicosis	Angus bulls sperm	s of either toxic or non-toxic fescue seed diets treatment	upregulated	25462855
165	Cattle	bta-miR-37a	miRNA	either toxic or non-toxic fescue seed diets	fescue toxicosis	Angus bulls sperm	s of either toxic or non-toxic fescue seed diets treatment	upregulated	25462855
166	Cattle	bta-miR-38a	miRNA	either toxic or non-toxic fescue seed diets	fescue toxicosis	Angus bulls sperm	s of either toxic or non-toxic fescue seed diets treatment	upregulated	25462855
167	Cattle	bta-miR-132	miRNA	Staphylococcus aureus	mastitis	Chinese Holstein cows	Staphylococcus aureus infection treatment	upregulated	31722768
168	Cattle	bta-miR-143	miRNA	metabolizable energy (ME)	adipogenesis	low body condition score (BCS) cows subcutaneous adipose tissue	overfed ME	upregulated in subcutaneous adipose tissue	28088407
169	Cattle	bta-miR-145	miRNA	Staphylococcus aureus	dairy cow mastitis	dairy cows mammary gland tissue	Staphylococcus aureus infection treatment	downregulated	30974481
170	Cattle	bta-miR-145	miRNA	Staphylococcus aureus	mastitis	Chinese Holstein cows	Staphylococcus aureus infection treatment	downregulated	31722768
171	Cattle	bta-miR-15a	miRNA	Staphylococcus aureus	mastitis	Chinese Holstein cows	Staphylococcus aureus infection treatment	"Differential expression of miR-15a and interleukin-1 receptor-associated kinase-like 2 (IRAK2), were evaluated by western blot and luciferase reporter assays"	31722768
172	Cattle	bta-miR-184	miRNA	Staphylococcus aureus	mastitis	Chinese Holstein cows	Staphylococcus aureus infection treatment	upregulated	31722768
173	Cattle	bta-miR-196a	miRNA	Staphylococcus aureus	mastitis	Chinese Holstein cows	Staphylococcus aureus infection treatment	downregulated	31722768
174	Cattle	bta-miR-200b	miRNA	Staphylococcus aureus	mastitis	Chinese Holstein cows	Staphylococcus aureus infection treatment	downregulated	31722768
175	Cattle	bta-miR-205	miRNA	Staphylococcus aureus	mastitis	Chinese Holstein cows	Staphylococcus aureus infection treatment	downregulated	31722768
176	Cattle	bta-miR-223	miRNA	Staphylococcus aureus	mastitis	Chinese Holstein cows	Staphylococcus aureus infection treatment	upregulated	31722768
177	Cattle	bta-miR-31	miRNA	Staphylococcus aureus	mastitis	Chinese Holstein cows	Staphylococcus aureus infection treatment	downregulated	31722768
178	Cattle	bta-miR-378	miRNA	metabolizable energy (ME)	adipogenesis	low body condition score (BCS) cows subcutaneous adipose tissue	overfed ME	upregulated in subcutaneous adipose tissue	28088407
179	Chicken	gga-miR-128-1-5p	miRNA	selenium (Se)	selenium (Se) deficiency symptoms	Vein endothelial cells (VECs)	Se deficiency treatment	upregulated	29904913
180	Chicken	gga-miR-33-3p	miRNA	selenium (Se)	apoptosis	vein tissues	Selenium (Se) deficiency treatment	upregulated	31249647
181	Chicken	gga-miR-429	miRNA	avian pathogenic escherichia coli (APEC)	avian pathogenic Escherichia coli (APEC) infection	broilers spleen of three groups of broilers	APEC-challenge	upregulated in spleen of three groups of broilers	27795362
182	Chicken	gga-let-7b	miRNA	subgroup J avian leukosis virus (ALV-J)	subgroup J avian leukosis virus (ALV-J) infection	liver and bone marrow tissues	subgroup J avian leukosis virus (ALV-J) infection	upregulated	28190219
183	Chicken	gga-let-7d	miRNA	Marek's disease virus (MDV)	Marek's disease (MD)	chicken skin	infect with MDV	upregulated in the skin	28410454
184	Chicken	gga-let-7i	miRNA	subgroup J avian leukosis virus (ALV-J)	subgroup J avian leukosis virus (ALV-J) infection	liver and bone marrow tissues	subgroup J avian leukosis virus (ALV-J) infection	upregulated	28190219
185	Chicken	gga-miR-122	miRNA	arsenite	arseniasis	chicken liver tissues and primary chicken liver cells (PCLCs)	arsenic (As) exposure	upregulated	31546213
186	Chicken	gga-miR-1306-5p	miRNA	lipopolysaccharide (LPS)	immune response	HD11 cells	lipopolysaccharide (LPS) treatment	upregulated	31338187
187	Chicken	gga-miR-1306-5p	miRNA	Salmonella enteritidis (SE)	immune response	"spleen, caecum, cecal tonsil, and bursa fabricius tissues"	Salmonella enteritidis (SE) infection treatment	upregulated	31338187
188	Chicken	gga-miR-130b-3p	miRNA	infectious bursal disease virus (IBDV)	infectious bursal disease virus (IBDV) infection	DF-1 cells	infect with IBDV	upregulated	29046449
189	Chicken	gga-mir-133	miRNA	brain-derived neurotrophic factor (BDNF)	retinocollicular/tectal map formation	retinal ganglion cell (RGC)	brain-derived neurotrophic factor (BDNF) treatment	upregulated	24431456
190	Chicken	gga-miR-138	miRNA	high temperature	high-temperature stress	chicks	heat challenge of 10-day-old previously high-temperature-conditioned chicks treatment	downregulated	25086319
191	Chicken	gga-miR-140*	miRNA	Marek's disease virus (MDV)	Marek's disease (MD)	spleen and lymphocytes	Marek's disease virus (MDV) infection	downregulated	23226446
192	Chicken	gga-miR-146a	miRNA	lipid associated membrane proteins (LAMP)	inflammation	chicken tracheal epithelial cells (TEC)	LAMP treatment	upregulated	25401327
193	Chicken	gga-miR-146c	miRNA	Marek's disease virus (MDV)	Marek's disease (MD)	spleen and lymphocytes	Marek's disease virus (MDV) infection	upregulated	23226446
194	Chicken	gga-miR-148a-3p	miRNA	ammonia (NH3)	necroptosis	Broiler chicken trachea tissues	ammonia (NH3) treatment	upregulated	31791863
195	Chicken	gga-miR-148a-3p	miRNA	ammonia (NH3)	respiratory system injury	chicken trachea	ammonia (NH3) treatment	lncRNA-107053293 regulated necroptosis by acting as a competing endogenous RNA of miR-148a-3p.	31791863
196	Chicken	gga-miR-15	miRNA	NaHS	respiratory toxicity	LMH cells; tracheal tissues	NaHS stimulation	LncRNA3037 is downregulated and miR-15a is upregulated in tracheal tissue and LMH cells under H 2S exposure.	31683218
197	Chicken	gga-miR-155	miRNA	reticuloendotheliosis virus (REV)	hepatocellular carcinoma (HCC)	chicken B-cell lymphomas	reticuloendotheliosis virus strain T (REV-T) infection treatment	reticuloendotheliosis virus strain T (REV-T) upregulates miR-155 in chicken embryo fibroblasts	19759154
198	Chicken	gga-miR-155	miRNA	lipopolysaccharide (LPS)	liver necroptosis	liver tissues	lipopolysaccharide (LPS) treatment	"Compared with the C group and Se group, the expression level of miR-155 and TRAF3 in the LPS group was upregulated."	33151563
199	Chicken	gga-miR-155	miRNA	polychlorinated biphenyls (PCBs)	polychlorinated biphenyls (PCBs) toxicity	primary chicken fibroblasts	PCBs (Arochlor-1250) treatment	"A significant downregulated of miR-155 and NF-kB was found in both groups exposed to A1250, regardless of being stimulated with Poly I:C or not, when compared to the virus stimulated group only"	29380441
200	Chicken	gga-miR-155	miRNA	reticuloendotheliosis virus (REV)	reticuloendotheliosis virus (REV) infection	chicken embryo fibroblasts (CEFs)	Reticuloendotheliosis virus (REV) treatment	miR-155 in CEFs after REV infection was upregulated in a time- and dose-dependent manner	32122614
201	Chicken	gga-miR-155	miRNA	reticuloendotheliosis virus (REV)	rev-T infection	primary chicken spleen and bone marrow cells	infect with Rev-T treatment	upregulated	28113043
202	Chicken	gga-mir-1551	miRNA	high temperature	heat stress	embryonic hearts	32 ¡ãC high temperatures treated maternal	upregulated	31466753
203	Chicken	gga-miR-1551	miRNA	manganese (Mn)	heat stress	embryonic hearts	manganese (Mn) feed	downregulated	31466753
204	Chicken	gga-miR-1586	miRNA	IFN-¦Ã	macrophage differentiation and activation	peripheral blood derived monocytes	IFN¦Ã treatment	dysregulated	27897122
205	Chicken	gga-miR-1594	miRNA	selenium (Se)	selenium (Se)-deficient cardiomyocytes injury	?chicken heart tissues	Selenium deficiency treatment	"TNNT2 suppression induced cardiac calcium overload in vivo and in vitro miR-1594 activates cardiac calcium overload by targeting TNNT2 Moreover, lnc-3215 regulates miR-1594, and thus influences the TNNT2 expression in vivo and in vitro"	31479920
206	Chicken	gga-miR-1594	miRNA	selenium (Se)	selenium (Se)-deficient cardiomyocytes injury	cardiomyocytes cells	Selenium deficiency treatment	"TNNT2 suppression induced cardiac calcium overload in vivo and in vitro miR-1594 activates cardiac calcium overload by targeting TNNT2 Moreover, lnc-3215 regulates miR-1594, and thus influences the TNNT2 expression in vivo and in vitro"	31479920
207	Chicken	gga-miR-15a	miRNA	hypoxia	adaptation to hypoxia	chicks embryonic lung tissue	were incubated in low oxygen (hypoxia) treatment	upregulated	24887070
208	Chicken	gga-miR-15a	miRNA	hydrogen sulfide (H2S)	respiratory toxicity	tracheal tissue	H2S?exposure	H2S exposure mediates apoptosis and necroptosis through lncRNA3037/miR-15/A20-BCL2.	31683218
209	Chicken	gga-miR-15b	miRNA	Marek's disease virus (MDV)	lymphoma	splenic tumor cells	Marek's disease virus infection	downregulated	22178800
210	Chicken	gga-miR-1610	miRNA	IFN-¦Ã	macrophage differentiation and activation	peripheral blood derived monocytes	IFN¦Ã treatment	dysregulated	27897122
211	Chicken	gga-miR-1618	miRNA	IFN-¦Ã	macrophage differentiation and activation	peripheral blood derived monocytes	IFN¦Ã treatment	dysregulated	27897122
212	Chicken	gga-miR-1627	miRNA	IFN-¦Ã	macrophage differentiation and activation	peripheral blood derived monocytes	IFN¦Ã treatment	dysregulated	27897122
213	Chicken	gga-miR-1633	miRNA	IFN-¦Ã	macrophage differentiation and activation	peripheral blood derived monocytes	IFN¦Ã treatment	dysregulated	27897122
214	Chicken	gga-miR-1646	miRNA	IFN-¦Ã	macrophage differentiation and activation	peripheral blood derived monocytes	IFN¦Ã treatment	dysregulated	27897122
215	Chicken	gga-miR-1647	miRNA	IFN-¦Ã	macrophage differentiation and activation	peripheral blood derived monocytes	IFN¦Ã treatment	dysregulated	27897122
216	Chicken	gga-miR-1649	miRNA	IFN-¦Ã	macrophage differentiation and activation	peripheral blood derived monocytes	IFN¦Ã treatment	dysregulated	27897122
217	Chicken	gga-miR-16-5p	miRNA	lead (Pb)	lead (Pb) toxicity	neutrophils	lead (Pb) treatment	Pb up-regulates miR-16-5p and leads to the subsequent downregulated of the target genes phosphoinositide-3-kinase regulatory subunit 1 (PiK3R1).	31918102
218	Chicken	gga-miR-16-5p	miRNA	hydrogen sulfide (H2S)	neutrophil extracellular traps (NETs) generation	neutrophil	hydrogen sulfide (H2S) treatment	H2S upregulated miR-16-5p.	32155482
219	Chicken	gga-miR-16-5p	miRNA	lipopolysaccharide (LPS)	tracheal injury	tracheal	lipopolysaccharide (LPS) treatment	upregulated	32125337
220	Chicken	gga-miR181a	miRNA	forskolin (FSK)	endothelial cell migration and angiogenesis	chicken auditory epithelium	Forskolin treatment	upregulated	20634979
221	Chicken	gga-miR-181a	miRNA	Marek's disease virus (MDV)	Marek's disease (MD)	spleen and lymphocytes	Marek's disease virus (MDV) infection	downregulated	23226446
222	Chicken	gga-miR-181a	miRNA	Marek's disease virus (MDV)	Marek's disease (MD)	"MD lymphoma cell line, MSB1"	Marek's disease virus (MDV) treatment	downregulated	26500265
223	Chicken	gga-miR-194	miRNA	¦Á-melanocyte-stimulating hormone (¦Á-MSH)	blinding ischemic retinopathies	retina	¦Á-melanocyte-stimulating hormone (¦Á-MSH) treatment	downregulated	26507936
224	Chicken	gga-miR-199*	miRNA	Marek's disease virus (MDV)	Marek's disease (MD)	spleen and lymphocytes	Marek's disease virus (MDV) infection	downregulated	23226446
225	Chicken	gga-miR-205a	miRNA	ammonia (NH3)	intestinal toxicity	jejunum	ammonia (NH3) treatment	Cooperative application of transcriptomics and ceRNA hypothesis: LncRNA-107052630/miR-205a/G0S2 crosstalk is involved in ammonia-induced intestinal apoptotic injury in chicken	32334290
226	Chicken	gga-miR-215-5p	miRNA	selenium (Se)	myocardial differentiation and development	myocardial tissues and primary cardiomyocyte cultures	Selenium (Se) deficiency treatment	upregulated	30565618
227	Chicken	gga-miR-216	miRNA	Marek's disease virus (MDV)	Marek's disease (MD)	spleen and intestinal intraepithelial lymphocytes (IEL) from 2 inbred chicken lines	host response to pathogen challenge treatment	upregulated	24879688
228	Chicken	gga-miR-221	miRNA	Marek's disease virus (MDV)	Marek's disease (MD)	spleen and lymphocytes	Marek's disease virus (MDV) infection	downregulated	23226446
229	Chicken	gga-miR-222	miRNA	Marek's disease virus (MDV)	Marek's disease (MD)	spleen and lymphocytes	Marek's disease virus (MDV) infection	downregulated	23226446
230	Chicken	gga-miR-26a	miRNA	Marek's disease virus (MDV)	Marek's disease (MD)	spleen and lymphocytes	Marek's disease virus (MDV) infection	downregulated	23226446
231	Chicken	gga-miR-26a	miRNA	Marek's disease virus (MDV)	Marek's disease (MD)	spleens of chickens MDV-infected spleens at cytolytic infection	MDV-infected treatment	downregulated	24795301
232	Chicken	gga-miR-29a-3p	miRNA	selenium (Se)	hepatocellular carcinoma (HCC)	chicken hepatocellular carcinoma cell line (LMH)	Selenium (Se) treatment	miR-29a-3p in LMH cells was decreased by Se supplementation	32039426
233	Chicken	gga-mir-33	miRNA	cadmium (Cd)	ion homeostasis	chickens chicken spleen	"cadmium chloride (CdCl2, 10 mg/kg) was administered in the diet of chickens for 90 days"	downregulated in	29223809
234	Chicken	gga-mir-33-5q	miRNA	cadmium (Cd)	cadmium-induced toxicity	spleen tissues	cadmium (Cd) treatment	Cd exposure suppressed miR-33-5q.	29223809
235	Chicken	gga-miR-34b-5p	miRNA	avian leukosis virus (ALV-J)	avian leukosis virus subgroup J (ALV-J) infection	chicken spleens	avian leukosis virus subgroup J (ALV-J) infection	upregulated	28194372
236	Chicken	gga-mir-34c	miRNA	high temperature	heat stress	embryonic hearts	32 ¡ãC high temperatures treated maternal	upregulated	31466753
237	Chicken	gga-miR-34c	miRNA	manganese (Mn)	heat stress	embryonic hearts	manganese (Mn) feed	downregulated	31466753
238	Chicken	gga-miR-375	miRNA	avian leukosis virus (ALV-J)	avian leukosis virus subgroup J (ALV-J) infection	DF-1 cell line	avian leukosis virus subgroup J (ALV-J) infection	downregulated	24694742
239	Chicken	gga-miR-375	miRNA	avian leukosis virus (ALV-J)	avian leukosis virus subgroup J (ALV-J) infection	DF-1 cells	avian leukosis virus (ALV-J) inhection	gga-miR-375 was downregulated by ALV-J infection.	32537011
240	Chicken	gga-miR-375	miRNA	avian leukosis virus (ALV-J)	hepatocellular carcinoma (HCC)	liver tumors of chickens	avian leukosis virus subgroup J (ALV-J) infection	gga-miR-375 was downregulated in the liver tumors of chickens infected with avian leukosis virus subgroup J (ALV-J).	30608205
241	Chicken	gga-miR-451	miRNA	mycoplasma gallisepticum (MG)	chronic respiratory disease (CRD)	chicken type II pneumocytes (CP-II)	Mycoplasma gallisepticum (MG) treatment	"exosomes from MG-infected CP-II cells alter the dynamics of the DF-1 cells, and may contribute to pathology of the MG infection via exosomal gga-miR-451 targeting YWHAZ involving in inflammation."	32307881
242	Chicken	gga-mir-548s	miRNA	daidzein (DA)	immune response	chicken liver tissues	daidzein (DA) treatment	downregulated	31057556
243	Chicken	gga-miR-6615-5p	miRNA	ammonia (NH3)	ammonia (NH3) toxicity	broiler	ammonia (NH3) treatment	"After NH3 exposure, miR-6615-5p expression was elevated."	33142454
244	Chicken	gga-miR-M11-5p	miRNA	gallid alphaherpesvirus 2 (GaHV2)	Marek's disease (MD)	chickens	infect with GaHV2	downregulated	28510513
245	Chicken	gga-miR-M4-5p	miRNA	Marek's disease virus (MDV)	Marek's disease (MD)	chicken embryo fibroblast (CEF)	marek's disease virus serotype 1 (MDV-1) treatment	"In lymphoblastoid cell lines derived from MDV-induced T-cell lymphomas, miR-M4-5p has been shown to be highly expressed."	33191002
246	Chicken	gga-miR-155	miRNA	methionine selenium	necroptosis	chicken liver tissues	methionine selenium treatment	"The current results suggested that methionine selenium antagonizes oxidative stress, inflammation, and the MAPK pathway, thereby antagonizing the occurrence of necroptosis through multiple mechanisms. At the same time, methionine selenium affects miR-155/TRAF3/MAPK signaling, reduces miR-155 expression, and upregulates TRAF3 expression to inhibit necroptosis."	33151563
247	Citrus	cj-miR152	miRNA	dehydration and salt	drought and salinity stresses	citrus roots	subjected to dehydration and salt treatment	upregulated	28165059
248	Citrus	cj-miR156b	miRNA	dehydration and salt	drought and salinity stresses	citrus roots	subjected to dehydration and salt treatment	upregulated	28165059
249	Citrus	cj-miR197	miRNA	dehydration and salt	drought and salinity stresses	citrus roots	subjected to dehydration and salt treatment	downregulated	28165059
250	Citrus	cj-miR203	miRNA	dehydration and salt	drought and salinity stresses	citrus roots	subjected to dehydration and salt treatment	upregulated	28165059
251	Citrus	cj-miR219	miRNA	dehydration and salt	drought and salinity stresses	citrus roots	subjected to dehydration and salt treatment	upregulated	28165059
252	Citrus	cj-miR3946	miRNA	dehydration and salt	drought and salinity stresses	citrus roots	subjected to dehydration and salt treatment	downregulated	28165059
253	Citrus	cj-miR3951	miRNA	dehydration and salt	drought and salinity stresses	citrus roots	subjected to dehydration and salt treatment	downregulated	28165059
254	Citrus	cj-miR395a	miRNA	boron	boron toxicity	11-week-old citrus seedlings	boron treatment	upregulated	26962011
255	Citrus	cj-miR397a	miRNA	boron	boron toxicity	11-week-old citrus seedlings	boron treatment	upregulated	26962011
256	Citrus	cj-miR408	miRNA	dehydration and salt	drought and salinity stresses	citrus roots	subjected to dehydration and salt treatment	upregulated	28165059
257	Citrus	cj-miR472	miRNA	dehydration and salt	drought and salinity stresses	citrus roots	subjected to dehydration and salt treatment	upregulated	28165059
258	Citrus	cj-miR482b	miRNA	dehydration and salt	drought and salinity stresses	citrus roots	subjected to dehydration and salt treatment	upregulated	28165059
259	Common carp	ccr-miR-155	miRNA	lead (Pb)	inflammation	head kidney tissues	Lead (Pb) poisoning	upregulated	32781208
260	Common carp	ccr-miR-122	miRNA	cadmium (Cd)	toxicity of cadmium (Cd)	head kidney	cadmium (Cd) treatment	downregulated	31951951
261	Common carp	ccr-miR-144	miRNA	vibrio harveyi and lipopolysaccharide (LPS)	teleost inflammatory responses	miiuy croaker macrophages	vibrio harveyi and lipopolysaccharide (LPS) treatment	upregulated	32815068
262	Common carp	ccr-miR-146a	miRNA	selenium (Se)	inflammation	head kidney of carp	Selenium (Se) deficiency treatment	downregulated	31125664
263	Common carp	ccr-miR-148a	miRNA	simvastatin	detoxification-related metabolism	Mugilogobius abei	Simvastatin treatment	upregulated	30240922
264	Common carp	ccr-miR-155	miRNA	cadmium (Cd)	immunotoxicity	Cyprinus carpio (C. carpio) kidneys	cadmium (Cd) treatment	upregulated	31693945
265	Common carp	ccr-miR-181-5p	miRNA	atrazine (2-chloro-4-ethylamino-6-isopropylamino-s-triazine; ATR)	inflammation	carp lymphocytes	atrazine (ATR)?exposure	downregulated	31580934
266	Common carp	ccr-miR-181a	miRNA	cadmium (Cd)	immunotoxicity	Cyprinus carpio (C. carpio) kidneys	cadmium (Cd) treatment	upregulated	31693945
267	Common carp	ccr-miR-193a-3p	miRNA	cadmium (Cd)	toxicity of cadmium (Cd)	head kidney	cadmium (Cd) treatment	downregulated	31951951
268	Common carp	ccr-miR-21	miRNA	lipopolysaccharide (LPS)	bacterial infection	"miiuy croaker liver, spleen, macrophage"	lipopolysaccharide (LPS) treatment	upregulated	31379828
269	Common carp	ccr-miR-216a	miRNA	cadmium (Cd)	cadmium-induced toxicity	splenic lymphocytes	cadmium (Cd) treatment	upregulated	32563067
270	Common carp	ccr-miR-217	miRNA	vibrio harveyi and lipopolysaccharide (LPS)	teleost inflammatory responses	miiuy croaker macrophages	vibrio harveyi and lipopolysaccharide (LPS) treatment	upregulated	32815068
271	Common carp	ccr-miR-2188-3p	miRNA	chlorpyrifos (CPF)	head kidney injury in common carp	head kidney of common carp	chlorpyrifos (CPF) exposure	downregulated	31479757
272	Common carp	ccr-miR-27a-5p	miRNA	cadmium (Cd)	toxicity of cadmium (Cd)	head kidney	cadmium (Cd) treatment	upregulated	31951951
273	Common carp	ccr-miR-27b-3p	miRNA	bisphenol A (BPA)	Bisphenol A (BPA) toxicity	spleen lymphocytes	bisphenol A (BPA) treatment	"BPA exposure can target up regulate CYP1B1 expression by down regulating miR-27b-3p expression, thus causing oxidative stress and inducing apoptosis of carp spleen lymphocytes through mitochondrial pathway."	32430284
274	Common carp	ccr-miR-31-12-5p	miRNA	cadmium (Cd)	cadmium-induced toxicity	spleens	cadmium (Cd) treatment	downregulated	32070891
275	Common carp	ccr-miR-375-4-3p	miRNA	cadmium (Cd)	cadmium-induced toxicity	spleens	cadmium (Cd) treatment	upregulated	32070891
276	Common carp	ccr-miR-6	miRNA	cadmium (Cd)	toxicity of cadmium (Cd)	head kidney	cadmium (Cd) treatment	downregulated	31951951
277	Common carp	ccr-miR-731	miRNA	chlorpyrifos (CPF)	head kidney injury in common carp	head kidney of common carp	chlorpyrifos (CPF) exposure	downregulated	31479757
278	Common carp	ccr-miR-9-6-5p	miRNA	cadmium (Cd)	cadmium-induced toxicity	spleens	cadmium (Cd) treatment	downregulated	32070891
279	Coregonus lavaretus	cla-miR-122-5p	miRNA	microcystin-leucine arginine (MC-LR)	liver damage	liver tissues	microcystin-LR treatment	upregulated	26345281
280	Coregonus lavaretus	cla-let-7c	miRNA	microcystin-leucine arginine (MC-LR)	cyanobacterial hepatotoxin microcystin-LR (MC-LR) toxicity	liver tissues	microcystin-LR (MC-LR) treatment	upregulated	22819808
281	Coregonus lavaretus	cla-miR-122	miRNA	microcystin-leucine arginine (MC-LR)	cyanobacterial hepatotoxin microcystin-LR (MC-LR) toxicity	liver tissues	microcystin-LR (MC-LR) treatment	upregulated	22819808
282	Coregonus lavaretus	cla-miR-16a	miRNA	microcystin-leucine arginine (MC-LR)	cyanobacterial hepatotoxin microcystin-LR (MC-LR) toxicity	liver tissues	microcystin-LR (MC-LR) treatment	upregulated	22819808
283	Coregonus lavaretus	cla-miR-21a	miRNA	microcystin-leucine arginine (MC-LR)	cyanobacterial hepatotoxin microcystin-LR (MC-LR) toxicity	liver tissues	microcystin-LR (MC-LR) treatment	upregulated	22819808
284	Coregonus lavaretus	cla-miR-34a	miRNA	microcystin-leucine arginine (MC-LR)	cyanobacterial hepatotoxin microcystin-LR (MC-LR) toxicity	liver tissues	microcystin-LR (MC-LR) treatment	upregulated	22819808
285	Coregonus lavaretus	cla-miR-9b	miRNA	microcystin-leucine arginine (MC-LR)	cyanobacterial hepatotoxin microcystin-LR (MC-LR) toxicity	liver tissues	microcystin-LR (MC-LR) treatment	upregulated	22819808
286	Cotton	ghr-miR-156	miRNA	high-temperature (HT)	male sterility	anthers of HT-insensitive (84021)	HT stress	downregulated	28635129
287	Cotton	ghr-miR-156	miRNA	high-temperature (HT)	male sterility	anthers of HT-sensitive (H05) cotton cultivars	HT stress	dysregulated	28635129
288	Cotton	ghr-miR-160	miRNA	high-temperature (HT)	male sterility	anthers of HT-insensitive (84021)	HT stress	downregulated	28635129
289	Cotton	ghr-miR-160	miRNA	high-temperature (HT)	male sterility	anthers of HT-sensitive (H05) cotton cultivars	HT stress	dysregulated	28635129
290	Cotton	ghr-miR414c	miRNA	Salinity	plant salinity tolerance	cotton cv. SF06 plants	Salinity stress induce treatment	downregulated	30676211
291	Crab-eating macaque	cad-miR-125b	miRNA	formaldehyde	apoptosis	nasal epithelium	Formaldehyde treatment	upregulated	23322811
292	Crab-eating macaque	cad-miR-142-3p	miRNA	formaldehyde	apoptosis	nasal epithelium	Formaldehyde treatment	downregulated	23322811
293	Crab-eating macaque	cad-miR-1228	miRNA	ethylene glycol monomethyl ether (EGME)	testicular toxicity	testis	ethylene glycol monomethyl ether (EGME) treatment	upregulated	25972197
294	Crab-eating macaque	cad-miR-2861	miRNA	ethylene glycol monomethyl ether (EGME)	testicular toxicity	testis	ethylene glycol monomethyl ether (EGME) treatment	upregulated	25972197
295	Crassostrea gigas	cgi-miR-365	miRNA	norepinephrine (NE)	against intertidal stress	Oyster Crassostrea gigas during desiccation	norepinephrine treatment	upregulated	28286314
296	Crassostrea gigas	cgi-miR-92d	miRNA	lipopolysaccharide (LPS)	inflammation	oyster Crassostrea gigas	lipopolysaccharide (LPS) treatment	upregulated	27346152
297	Creeping bentgrass	ast-miR396	miRNA	long-day (LD) photoperiod and vernalization	flower development	creeping bentgrass (Agrostis stolonifera L.)	long-day (LD) photoperiod and vernalization	Gene expression analysis reveals that miR396 is induced by long-day (LD) photoperiod and vernalization.	33328434
298	Cucumber	csa-miR172c	miRNA	high temperature	effects of high-temperature on Cucumis sativus L.	cucumber	high-temperature	upregulated	31125116
299	Cucumber	csa-miR261	miRNA	high temperature	effects of high-temperature on Cucumis sativus L.	cucumber	high-temperature	downregulated	31125116
300	Cucumber	csa-miR6196	miRNA	high temperature	effects of high-temperature on Cucumis sativus L.	cucumber	high-temperature	upregulated	31125116
301	Cucumber	csa-miR8597	miRNA	high temperature	effects of high-temperature on Cucumis sativus L.	cucumber	high-temperature	downregulated	31125116
302	Dog	cfa-miR-122	miRNA	NP260	hepatotoxicity	dogs	NP260 treatment	upregulated	24699182
303	Dog	cfa-miR-107	miRNA	calorie restriction (CR)	obesity	overweight pet dogs	calorie restriction (CR) treatment	"downregulated (miR-23 , miR-107) and upregulation (miR-21) in muscle biopsies"	26701817
304	Dog	cfa-miR-143	miRNA	canine influenza virus (CIV) H3N2	apoptosis	canine kidney (MDCK) cells	infect with CIV H3N2	upregulated	29186842
305	Dog	cfa-miR-15b	miRNA	gentamicin	acute kidney injury (AKI)	Urine	gentamicin treatment	downregulated	33290828
306	Dog	cfa-miR-15b-3p	miRNA	gentamicin	acute kidney injury (AKI)	Urine	gentamicin treatment	downregulated	33290828
307	Dog	cfa-miR-16	miRNA	gentamicin	acute kidney injury (AKI)	Urine	gentamicin treatment	downregulated	33290828
308	Dog	cfa-miR-21	miRNA	calorie restriction (CR)	obesity	overweight pet dogs	calorie restriction (CR) treatment	"downregulated (miR-23 , miR-107) and upregulation (miR-21) in muscle biopsies"	26701817
309	Dog	cfa-miR-23	miRNA	calorie restriction (CR)	obesity	overweight pet dogs	calorie restriction (CR) treatment	"downregulated (miR-23 , miR-107) and upregulation (miR-21) in muscle biopsies"	26701817
310	Dog	cfa-miR-26a	miRNA	influenza A virus (IAV)	influenza A virus (IAV) infection	Madin-Darby canine kidney cell line MDCK	influenza A virus(IAV) infection	downregulated	28674773
311	Dog	cfa-miR-30a	miRNA	gentamicin	acute kidney injury (AKI)	Urine	gentamicin treatment	upregulated	33290828
312	Dog	cfa-miR-30a-3p	miRNA	gentamicin	acute kidney injury (AKI)	Urine	gentamicin treatment	upregulated	33290828
313	Dog	cfa-miR-30c-2-3p	miRNA	gentamicin	acute kidney injury (AKI)	Urine	gentamicin treatment	upregulated	33290828
314	Dog	cfa-miR-192	miRNA	X-rays	injury in retinal ganglion	retinal ganglion cell line (RGC-5 cells)	X-rays treatment	upregulated	26081562
315	Dog	cfa-miR-21	miRNA	matrix metalloproteinases inhibitor (MMPi)	fibrodysplasia (FD)	cervical subcutaneous tissue	MMP-inhibitor (MMPi) treatment	miR-21 expression in the cervical subcutaneous tissue was a sensitive and specific biomarker of FD incidence	23688202
316	Dog	cfa-miR-210	miRNA	X-rays	injury in retinal ganglion	retinal ganglion cell line (RGC-5 cells)	X-rays treatment	downregulated	26081562
317	Dog	cfa-miR-212	miRNA	X-rays	injury in retinal ganglion	retinal ganglion cell line (RGC-5 cells)	X-rays treatment	downregulated	26081562
318	Dog	cfa-miR-216a	miRNA	cerulein	acute pancreatic injury	pancreas	cerulein treatment	upregulated	30301227
319	Dog	cfa-miR-219-5p	miRNA	X-rays	injury in retinal ganglion	retinal ganglion cell line (RGC-5 cells)	X-rays treatment	downregulated	26081562
320	Dog	cfa-miR-22	miRNA	X-rays	injury in retinal ganglion	retinal ganglion cell line (RGC-5 cells)	X-rays treatment	upregulated	26081562
321	Dog	cfa-miR-338	miRNA	X-rays	injury in retinal ganglion	retinal ganglion cell line (RGC-5 cells)	X-rays treatment	downregulated	26081562
322	Dog	cfa-miR-34a	miRNA	X-rays	injury in retinal ganglion	retinal ganglion cell line (RGC-5 cells)	X-rays treatment	upregulated	26081562
323	Dog	cfa-miR-34a*	miRNA	X-rays	injury in retinal ganglion	retinal ganglion cell line (RGC-5 cells)	X-rays treatment	upregulated	26081562
324	Dog	cfa-miR-34c	miRNA	X-rays	injury in retinal ganglion	retinal ganglion cell line (RGC-5 cells)	X-rays treatment	upregulated	26081562
325	Dog	cfa-miR-375	miRNA	cerulein	acute pancreatic injury	pancreas	cerulein treatment	upregulated	30301227
326	Dog	cfa-miR-503	miRNA	X-rays	injury in retinal ganglion	retinal ganglion cell line (RGC-5 cells)	X-rays treatment	downregulated	26081562
327	Dog	cfa-miR-505*	miRNA	X-rays	injury in retinal ganglion	retinal ganglion cell line (RGC-5 cells)	X-rays treatment	downregulated	26081562
328	Dog	cfa-miR-877	miRNA	X-rays	injury in retinal ganglion	retinal ganglion cell line (RGC-5 cells)	X-rays treatment	upregulated	26081562
329	Domestic guinea pig	ssc-miR-1	miRNA	arsenic trioxide (ATO)	acute promyelocytic leukemia (APL)	the heart of guinea pig	arsenic trioxide (As2O3) treatment	upregulated	22889704
330	Domestic guinea pig	ssc-miR-103-2	miRNA	uterine artery ablation	low birth weight (LBW)	guinea pig	uterine artery ablation and fed a control diet from weaning to 145 days treatment	upregulated	24926663
331	Domestic guinea pig	ssc-miR-133	miRNA	arsenic trioxide (ATO)	acute promyelocytic leukemia (APL)	the heart of guinea pig	arsenic trioxide (As2O3) treatment	upregulated	22889704
332	Domestic guinea pig	ssc-miR-24	miRNA	uterine artery ablation	low birth weight (LBW)	guinea pig	uterine artery ablation and fed a control diet from weaning to 145 days treatment	upregulated	24926663
333	Domestic silkworm	bmo-miR-275	miRNA	20-hydroxyecdysone (20-HE)	insects development	BmE cells	20-Hydroxyecdysone (20-HE) treatment	upregulated	32482109
334	Domestic silkworm	bmo-miR-305	miRNA	20-hydroxyecdysone (20-HE)	insects development	BmE cells	20-Hydroxyecdysone (20-HE) treatment	upregulated	32482109
335	Eutrema salsugineum	esa-miR165	miRNA	red light (RL)	effects of red light (RL) on plants	eutrema salsugineum	red light (RL) treatment	downregulated	33301852
336	Eutrema salsugineum	esa-miR395	miRNA	red light (RL)	effects of red light (RL) on plants	eutrema salsugineum	red light (RL) treatment	downregulated	33301852
337	Eutrema salsugineum	esa-miR408	miRNA	red light (RL)	effects of red light (RL) on plants	eutrema salsugineum	red light (RL) treatment	downregulated	33301852
338	Fruit fly	dme-miR-12	miRNA	wolbachia	wolbachia infection	testes tissues	Wolbachia infection treatment	upregulated	31491378
339	Fruit fly	dme-miR-8-5p	miRNA	drosophila C virus (DCV)	drosophila C virus (DCV) infection	drosophila S2 cells	Drosophila C virus (DCV) treatment	downregulated	28691661
340	Fruit fly	dme-miR-956-3p	miRNA	drosophila C virus (DCV)	drosophila C virus (DCV) infection	Fly	Drosophila C virus (DCV) treatment	upregulated	27960110
341	Fruit fly	dme-miR-956-3p	miRNA	drosophila C virus (DCV)	drosophila C virus (DCV) infection	Drosophila S2 cells	Drosophila C virus (DCV) treatment	"Comparison of the miRNA expression profiles in DCV-infected and uninfected Fly showed altered miRNA levels due to DCV infection, with the largest change in abundance observed for miR-956-3p."	27960110
342	Fruit fly	dme-miR-1008-5p	miRNA	¦Á-synuclein (¦Á-Syn)	parkinson's disease (PD)	fly heads	¦Á-synuclein treatment	upregulated	26361355
343	Fruit fly	dme-miR-133-3p	miRNA	¦Á-synuclein (¦Á-Syn)	parkinson's disease (PD)	fly heads	¦Á-synuclein treatment	upregulated	26361355
344	Fruit fly	dme-miR-137-3p	miRNA	¦Á-synuclein (¦Á-Syn)	parkinson's disease (PD)	fly heads	¦Á-synuclein treatment	upregulated	26361355
345	Fruit fly	dme-miR-13b-3p	miRNA	¦Á-synuclein (¦Á-Syn)	parkinson's disease (PD)	fly heads	¦Á-synuclein treatment	upregulated	26361355
346	Fruit fly	dme-miR-932-5p	miRNA	¦Á-synuclein (¦Á-Syn)	parkinson's disease (PD)	fly heads	¦Á-synuclein treatment	upregulated	26361355
347	Goat	chi-miR-1	miRNA	peste des petits ruminants virus (PPRV)	peste des petits ruminants (PPR) virus infection	NK cells	peste des petits ruminants virus (PPRV) infection treatment	PPRV infection induced TWEAK expression in goat NK cells involving post-transcription by suppressing miR-1	32038620
348	Goat	chi-miR-1246	miRNA	peste des petits ruminants virus (PPRV)	peste des petits ruminants (PPR) virus infection	goats lung and spleen	infect with PPR treatment	dysregulated inin lung and spleen	28694795
349	Goat	chi-miR-135b	miRNA	prolactin (PRL)	lactogenesis	goat mammary epithelial cells	Prolactin treatment	downregulated	28332185
350	Goat	chi-miR-135b	miRNA	"prolactin,IGF-1"	lactogenesis	goat mammary gland	2.5 ¦Ìg/ml prolactin and 2.5 ¦Ìg/ml IGF-1 treatment	upregulated in the goat mammary gland	28332185
351	Goat	chi-miR-21-3p	miRNA	peste des petits ruminants virus (PPRV)	peste des petits ruminants (PPR) virus infection	goats lung and spleen	infect with PPR treatment	dysregulated inin lung and spleen	28694795
352	Goat	chi-miR-218	miRNA	petits ruminants virus (PPRV)	peste des petits ruminants (PPR) virus infection	goat peripheral blood mononuclear cells (PBMCs)	petits ruminants virus (PPRV) infection treatment	downregulated	31616415
353	Goat	chi-miR-27a-5p	miRNA	peste des petits ruminants virus (PPRV)	peste des petits ruminants (PPR) virus infection	goats lung and spleen	infect with PPR treatment	dysregulated inin lung and spleen	28694795
354	Goat	chi-miR-3	miRNA	peste des petits ruminants virus (PPRV)	peste des petits ruminants virus (PPRV) infection	peripheral blood mononuclear cells (PBMCs)	peste des petits ruminants virus (PPRV) infection treatment	"We report that a novel microRNA in goat PBMCs, novel miR-3, was upregulated by PPRV to facilitate virus infection"	33504605
355	Goat	chi-miR-320a	miRNA	peste des petits ruminants virus (PPRV)	peste des petits ruminants (PPR) virus infection	goats lung and spleen	infect with PPR treatment	dysregulated inin lung and spleen	28694795
356	Goat	chi-miR-363	miRNA	peste des petits ruminants virus (PPRV)	peste des petits ruminants (PPR) virus infection	goats lung and spleen	infect with PPR treatment	dysregulated inin lung and spleen	28694795
357	Goat	chi-miR-760-3p	miRNA	peste des petits ruminants virus (PPRV)	peste des petits ruminants (PPR) virus infection	goats lung and spleen	infect with PPR treatment	dysregulated inin lung and spleen	28694795
358	Green monkey	mml-miR-30c-5p	miRNA	porcine epidemic diarrhea virus (PEDV)	porcine epidemic diarrhea virus (PEDV) infection	Vero E6 cells	Porcine epidemic diarrhea virus (PEDV) treatment	PEDV infection increased SOCS1 expression by decreasing host miR-30c-5p expression	32574254
359	Green monkey	mml-miR-127	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	porcine reproductive and respiratory syndrome virus (PRRSV) infection	MARC145 cells	infect with PRRSV treatment	different regulation	25077995
360	Green monkey	mml-miR-145	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	porcine reproductive and respiratory syndrome virus (PRRSV) infection	MARC145 cells	infect with PRRSV treatment	different regulation	25077995
361	Green monkey	mml-miR-181a	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	porcine reproductive and respiratory syndrome virus (PRRSV) infection	MARC145 cells	infect with PRRSV treatment	different regulation	25077995
362	Green monkey	mml-miR-204	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	porcine reproductive and respiratory syndrome virus (PRRSV) infection	MARC145 cells	infect with PRRSV treatment	different regulation	25077995
363	Green monkey	mml-miR-21	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	porcine reproductive and respiratory syndrome virus (PRRSV) infection	MARC145 cells	infect with PRRSV treatment	different regulation	25077995
364	Green monkey	mml-miR-29	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	porcine reproductive and respiratory syndrome virus (PRRSV) infection	MARC145 cells	infect with PRRSV treatment	different regulation	25077995
365	Green monkey	mml-miR-373	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	porcine reproductive and respiratory syndrome virus (PRRSV) infection	MARC-145	infect with PRRSV treatment	upregulated	27881653
366	Horse	eca-miR-140-3p	miRNA	metformin (Met)	horses equine metabolic syndrome	adipose-derived stromal cells isolated from equine metabolic syndrome horses (EqASCEMS)	metformin (MF) treatment	downregulated	30678275
367	Horse	eca-miR-145-5p	miRNA	cladophora glomerata methanolic extract	chondrogenesis	equine metabolic syndrome adipose-derived mesenchymal stromal stem cells (ASCsEMS)	Cladophora glomerata methanolic extract treatment	downregulated	31847882
368	Horse	eca-miR-145-5p	miRNA	metformin (Met)	horses equine metabolic syndrome	adipose-derived stromal cells isolated from equine metabolic syndrome horses (EqASCEMS)	metformin (MF) treatment	downregulated	30678275
369	Horse	eca-miR-146-3p	miRNA	cladophora glomerata methanolic extract	chondrogenesis	equine metabolic syndrome adipose-derived mesenchymal stromal stem cells (ASCsEMS)	Cladophora glomerata methanolic extract treatment	downregulated	31847882
370	Horse	eca-miR-155	miRNA	lipopolysaccharide (LPS)	endotoxemia	equine peripheral blood mononuclear cells	lipopolysaccharide (LPS) treatment	upregulated	28552958
371	Horse	eca-miR-16-5p	miRNA	metformin (Met)	horses equine metabolic syndrome	adipose-derived stromal cells isolated from equine metabolic syndrome horses (EqASCEMS)	metformin (MF) treatment	downregulated	30678275
372	Horse	eca-miR-21-5p	miRNA	metformin (Met)	horses equine metabolic syndrome	adipose-derived stromal cells isolated from equine metabolic syndrome horses (EqASCEMS)	metformin (MF) treatment	downregulated	30678275
373	Horse	eca-miR-29a-3p	miRNA	metformin (Met)	horses equine metabolic syndrome	adipose-derived stromal cells isolated from equine metabolic syndrome horses (EqASCEMS)	metformin (MF) treatment	downregulated	30678275
374	Horse	eca-miR-34a	miRNA	cladophora glomerata methanolic extract	chondrogenesis	equine metabolic syndrome adipose-derived mesenchymal stromal stem cells (ASCsEMS)	Cladophora glomerata methanolic extract treatment	downregulated	31847882
375	Horse	eca-miR-449a	miRNA	cladophora glomerata methanolic extract	chondrogenesis	equine metabolic syndrome adipose-derived mesenchymal stromal stem cells (ASCsEMS)	Cladophora glomerata methanolic extract treatment	downregulated	31847882
376	Horse	eca-let-7d-3p	miRNA	sprint training	training responses	thoroughbred racehorses skeletal muscle samples	sprint training treatment	dysregulated	29166903
377	Horse	eca-let-7d-5p	miRNA	sprint training	training responses	thoroughbred racehorses skeletal muscle samples	sprint training treatment	dysregulated	29166903
378	Horse	eca-miR-21-5p	miRNA	sprint training	training responses	thoroughbred racehorses skeletal muscle samples	sprint training treatment	dysregulated	29166903
379	Horse	eca-miR-30b-5p	miRNA	sprint training	training responses	thoroughbred racehorses skeletal muscle samples	sprint training treatment	dysregulated	29166903
380	Horse	eca-miR-30e-5p	miRNA	sprint training	training responses	thoroughbred racehorses skeletal muscle samples	sprint training treatment	dysregulated	29166903
381	Human cytomegalovirus	hcmv-miR-UL112-1	miRNA	human cytomegalovirus (HCMV)	human cytomegalovirus (HCMV) infection	"human embryonic lung fibroblast cell line, MRC-5"	HCMV infection	upregulated	23402302
382	Maize	zma-miR156f	miRNA	phosphorus (Pi)	phosphorus (Pi) starvation	maize seeds	phosphorus (P) treatment	"downregulated (miR156f, miR169h , miR396a); upregulation(miR396c, miR408) in roots and leaves"	26572939
383	Maize	zma-miR169h	miRNA	phosphorus (Pi)	phosphorus (Pi) starvation	maize seeds	phosphorus (P) treatment	"downregulated (miR156f, miR169h , miR396a); upregulation(miR396c, miR408) in roots and leaves"	26572939
384	Maize	zma-miR396a	miRNA	phosphorus (Pi)	phosphorus (Pi) starvation	maize seeds	phosphorus (P) treatment	"downregulated (miR156f, miR169h , miR396a); upregulation(miR396c, miR408) in roots and leaves"	26572939
385	Maize	zma-miR396c	miRNA	phosphorus (Pi)	phosphorus (Pi) starvation	maize seeds	phosphorus (P) treatment	"downregulated (miR156f, miR169h , miR396a); upregulation(miR396c, miR408) in roots and leaves"	26572939
386	Maize	zma-miR408	miRNA	phosphorus (Pi)	phosphorus (Pi) starvation	maize seeds	phosphorus (P) treatment	"downregulated (miR156f, miR169h , miR396a); upregulation(miR396c, miR408) in roots and leaves"	26572939
387	Malus hupehensis	Mh-miR168a	miRNA	botryosphaeria dothidea	botryosphaeria dothidea Infection	malus hupehensis	botryosphaeria dothidea infection	upregulated	28633325
388	Malus hupehensis	Mh-miR397	miRNA	botryosphaeria dothidea	resistance of plants to pathogens	Malus hupehensis	bothrops moojeni snake venom (BmooLAAO-I) treatment	MicroRNA397b negatively regulates resistance of Malus hupehensis to Botryosphaeria dothidea by modulating MhLAC7 involved in lignin biosynthesis.	32005395
389	Manduca sexta	mse-miR-281*	miRNA	"E. coli, M. luteus, and curdlan"	insect immunity	tobacco hornworm Manduca sexta	"E. coli, M. luteus, and curdlan was injected into day 2, 5th instar larvae treatment"	"Mse-miR-281-star, mse-miR-965-star, mse-miR-31-star, and mse-miR-9b-star were present at higher levels than their respective mature strands."	24508515
390	Manduca sexta	mse-miR-31*	miRNA	"E. coli, M. luteus, and curdlan"	insect immunity	tobacco hornworm Manduca sexta	"E. coli, M. luteus, and curdlan was injected into day 2, 5th instar larvae treatment"	"Mse-miR-281-star, mse-miR-965-star, mse-miR-31-star, and mse-miR-9b-star were present at higher levels than their respective mature strands."	24508515
391	Manduca sexta	mse-miR-965*	miRNA	"E. coli, M. luteus, and curdlan"	insect immunity	tobacco hornworm Manduca sexta	"E. coli, M. luteus, and curdlan was injected into day 2, 5th instar larvae treatment"	"Mse-miR-281-star, mse-miR-965-star, mse-miR-31-star, and mse-miR-9b-star were present at higher levels than their respective mature strands."	24508515
392	Manduca sexta	mse-miR-9b*	miRNA	"E. coli, M. luteus, and curdlan"	insect immunity	tobacco hornworm Manduca sexta	"E. coli, M. luteus, and curdlan was injected into day 2, 5th instar larvae treatment"	"Mse-miR-281-star, mse-miR-965-star, mse-miR-31-star, and mse-miR-9b-star were present at higher levels than their respective mature strands."	24508515
393	Marsupenaeus japonicus	gja-miR-100	miRNA	Vibrio alginolyticus	Vibrio alginolyticus infection	shrimp hemocytes	Vibrio alginolyticus infection for 24 h treatment	upregulated	28181552
394	Marsupenaeus japonicus	gja-miR-100	miRNA	white spot syndrome virus (WSSV)	white spot syndrome virus (WSSV) infection	shrimp hemocytes	WSSV infection for 24 h treatment	upregulated	28181552
395	Marsupenaeus japonicus	gja-miR-S5	miRNA	Vibrio alginolyticus	Vibrio alginolyticus infection	shrimp hemocytes	Vibrio alginolyticus infection	upregulated	28986214
396	Marsupenaeus japonicus	gja-miR-S5	miRNA	white spot syndrome virus (WSSV)	white spot syndrome virus (WSSV) infection	shrimp hemocytes	WSSV infection	upregulated	28986214
397	Megalobrama amblycephala	mam-miR-145	miRNA	high fat diet (HFD)	hepatic steatosis	fish	high fat diet (HFD) feed	downregulated	24788396
398	Megalobrama amblycephala	mam-miR-15a-5p	miRNA	high fat diet (HFD)	hepatic steatosis	fish	high fat diet (HFD) feed	downregulated	24788396
399	Megalobrama amblycephala	mam-miR-30c	miRNA	high fat diet (HFD)	hepatic steatosis	fish	high fat diet (HFD) feed	upregulated	24788396
400	Megalobrama amblycephala	mam-miR-30e-3p	miRNA	high fat diet (HFD)	hepatic steatosis	fish	high fat diet (HFD) feed	upregulated	24788396
401	Mi-iuy croaker	mmi-miR-3570	miRNA	rhabdovirus	host antiviral defense	miiuy croaker macrophages	rhabdovirus treatment	rhabdovirus infection significantly upregulated host miR-3570 expression in miiuy croaker macrophages.	29093090
402	Mi-iuy croaker	mmi-miR-148	miRNA	lipopolysaccharide (LPS)	inflammation	miiuy croaker liver and spleen	LPS treatment	upregulated	28646187
403	Mi-iuy croaker	mmi-miR-216a	miRNA	vibrio anguillarum	inflammation	spleen; kidney	Vibrio anguillarum infection	upregulated	29632247
404	Mi-iuy croaker	mmi-miR-3570	miRNA	vibrio anguillarum	Vibrio anguillarum infection	miiuy croakers liver samples	challenged i.p. with 1 ml of V. anguillarum (1.5 3 108 CFU/ml) treatment	upregulated in liver samples	28250156
405	Mi-iuy croaker	mmi-miR-21	miRNA	vibrio anguillarum	bacterial infection	"miiuy croaker liver, spleen"	Vibrio anguillarum infection treatment	upregulated	31379828
406	Mi-iuy croaker	mmi-miR-216a	miRNA	lipopolysaccharide (LPS)	inflammation	spleen; kidney; macrophages	lipopolysaccharide (LPS) treatment	upregulated	29632247
407	Mi-iuy croaker	mmi-mir-217-5p	miRNA	lipopolysaccharide (LPS)	inflammation	macrophage isolated from the head kidneys of juvenile miiuy croakers	lipopolysaccharide (LPS) treatment	upregulated	27832948
408	Mi-iuy croaker	mmi-miR-217-5p	miRNA	lipopolysaccharide (LPS)	innate immune response	macrophage	lipopolysaccharide (LPS) treatment	upregulated	27832948
409	Mi-iuy croaker	mmi-mir-8159-5p	miRNA	lipopolysaccharide (LPS)	inflammation	macrophage isolated from the head kidneys of juvenile miiuy croakers	lipopolysaccharide (LPS) treatment	upregulated	27832948
410	Mi-iuy croaker	mmi-miR-8159-5p	miRNA	lipopolysaccharide (LPS)	innate immune response	macrophage	lipopolysaccharide (LPS) treatment	upregulated	27832948
411	Mongolian gerbil	mun-miR-155	miRNA	CTB-UE	H. pylori infection	CTB-UE	CTB-UE treatment	downregulated	25093281
412	Murine cytomegalovirus	mcmv-miR-m01-4-3p	miRNA	diosbuibin B (DB)	liver damage	mouse serum	diosbuibin B (DB) treatment	upregulated	30844585
413	Murine cytomegalovirus	mcmv-miR-m01-4-3p	miRNA	monocrotaline (MCT)	liver damage	mouse serum	monocrotaline (MCT) treatment	upregulated	30844585
414	Murine cytomegalovirus	mcmv-miR-m01-4-3p	miRNA	toosendanin (TSN)	liver damage	mouse serum	toosendanin (TSN) treatment	upregulated	30844585
415	Murine cytomegalovirus	mcmv-miR-m01-4-5p	miRNA	murine cytomegalovirus (MCMV)	murine cytomegalovirus (MCMV) infection	peripheral blood monocytes	murine cytomegalovirus (MCMV) infection	upregulated	33245094
416	Murine cytomegalovirus	mcmv-miR-m01-4-5p	miRNA	murine cytomegalovirus (MCMV)	murine cytomegalovirus (MCMV) infection	thoracic aorta	murine cytomegalovirus (MCMV) infection	upregulated	33245094
417	Murine cytomegalovirus	mcmv-miR-m01-4-5p	miRNA	murine cytomegalovirus (MCMV)	murine cytomegalovirus (MCMV) infection	cardiac tissue	murine cytomegalovirus (MCMV) infection	upregulated	33245094
418	Murine cytomegalovirus	mcmv-miR-m88-1-3p	miRNA	murine cytomegalovirus (MCMV)	murine cytomegalovirus (MCMV) infection	cardiac tissue	murine cytomegalovirus (MCMV) infection	downregulated	33245094
419	Nicotiana benthamiana	nbe-miR-168	miRNA	beet necrotic yellow vein virus (BNYVV)	beet necrotic yellow vein virus (BNYVV) infection	N. benthamiana	beet necrotic yellow vein virus (BNYVV) infection	upregulated	32178444
420	Nicotiana benthamiana	nbe-miR-398	miRNA	beet necrotic yellow vein virus (BNYVV)	beet necrotic yellow vein virus (BNYVV) infection	N. benthamiana	beet necrotic yellow vein virus (BNYVV) infection	upregulated	32178444
421	Oreochromis niloticus	oni-miR-122	miRNA	high fat diet (HFD)	fatty liver disease	liver tissues	high fat diet (HFD) feed	upregulated	30344495
422	Oreochromis niloticus	oni-miR-127	miRNA	streptococcus iniae	streptococcus infection	peritoneal exudate macrophages (PEMs)	infect with Streptococcus iniae treatment	upregulated	28219342
423	Oreochromis niloticus	oni-miR-145-5p	miRNA	high fat diet (HFD)	fatty liver disease	farmed tilapia liver	high fat diet (HFD) feed	dysregulated	28838655
424	Oreochromis niloticus	oni-miR-146-3p	miRNA	streptococcus iniae	streptococcus infection	peritoneal exudate macrophages (PEMs)	infect with Streptococcus iniae treatment	downregulated	28219342
425	Oreochromis niloticus	oni-miR-205-5p	miRNA	high fat diet (HFD)	fatty liver disease	farmed tilapia liver	high fat diet (HFD) feed	dysregulated	28838655
426	Oreochromis niloticus	oni-miR-23a-3p	miRNA	high fat diet (HFD)	fatty liver disease	farmed tilapia liver	high fat diet (HFD) feed	dysregulated	28838655
427	Oreochromis niloticus	oni-miR-29a	miRNA	high fat diet (HFD)	fatty liver disease	farmed tilapia liver	high fat diet (HFD) feed	dysregulated	28838655
428	Oreochromis niloticus	oni-miR-30a-5p	miRNA	high fat diet (HFD)	fatty liver disease	farmed tilapia liver	high fat diet (HFD) feed	dysregulated	28838655
429	Oreochromis niloticus	oni-miR-310-3p	miRNA	streptococcus iniae	streptococcus infection	peritoneal exudate macrophages (PEMs)	infect with Streptococcus iniae treatment	upregulated	28219342
430	Oreochromis niloticus	oni-miR-34a	miRNA	high fat diet (HFD)	fatty liver disease	farmed tilapia liver	high fat diet (HFD) feed	dysregulated	28838655
431	Oreochromis niloticus	oni-miR-375-5p	miRNA	streptococcus iniae	streptococcus infection	peritoneal exudate macrophages (PEMs)	infect with Streptococcus iniae treatment	downregulated	28219342
432	Oreochromis niloticus	oni-miR-694	miRNA	streptococcus iniae	streptococcus infection	peritoneal exudate macrophages (PEMs)	infect with Streptococcus iniae treatment	downregulated	28219342
433	Oreochromis niloticus	oni-miR-92	miRNA	streptococcus iniae	streptococcus infection	peritoneal exudate macrophages (PEMs)	infect with Streptococcus iniae treatment	upregulated	28219342
434	Oreochromis niloticus	oni-miR-92d-3p	miRNA	streptococcus iniae	streptococcus infection	peritoneal exudate macrophages (PEMs)	infect with Streptococcus iniae treatment	downregulated	28219342
435	Paralichthys olivaceus	pol-miR-3p-2	miRNA	Edwardsiella tarda	edwardsiella tarda infection	spleen tissues; liver tissues; gill tissues	Edwardsiella tarda infection	upregulated	31668931
436	Pea	psa-miR398a	miRNA	dehydration	water deficit	pea roots and shoots	dehydration treatment	downregulated	25064597
437	Pea	psa-miR398b	miRNA	dehydration	water deficit	pea roots and shoots	dehydration treatment	downregulated	25064597
438	Pea	psa-miR408	miRNA	dehydration	water deficit	pea roots and shoots	dehydration treatment	downregulated	25064597
439	Peach	ppe-miR156	miRNA	synthetic auxin ¦Á-naphthylacetic acid (NAA)	fruit development	mesocarp at the hard core stage following treatment of the peach (Prunus persica L.) fruit	NAA treatment	downregulated	29236054
440	Peach	ppe-miR160	miRNA	synthetic auxin ¦Á-naphthylacetic acid (NAA)	fruit development	mesocarp at the hard core stage following treatment of the peach (Prunus persica L.) fruit	NAA treatment	downregulated	29236054
441	Peach	ppe-miR166	miRNA	synthetic auxin ¦Á-naphthylacetic acid (NAA)	fruit development	mesocarp at the hard core stage following treatment of the peach (Prunus persica L.) fruit	NAA treatment	downregulated	29236054
442	Peach	ppe-miR167	miRNA	synthetic auxin ¦Á-naphthylacetic acid (NAA)	fruit development	mesocarp at the hard core stage following treatment of the peach (Prunus persica L.) fruit	NAA treatment	downregulated	29236054
443	Peach	ppe-miR2118	miRNA	synthetic auxin ¦Á-naphthylacetic acid (NAA)	fruit development	mesocarp at the hard core stage following treatment of the peach (Prunus persica L.) fruit	NAA treatment	downregulated	29236054
444	Peach	ppe-miR390	miRNA	synthetic auxin ¦Á-naphthylacetic acid (NAA)	fruit development	mesocarp at the hard core stage following treatment of the peach (Prunus persica L.) fruit	NAA treatment	downregulated	29236054
445	Peach	ppe-miR393	miRNA	synthetic auxin ¦Á-naphthylacetic acid (NAA)	fruit development	mesocarp at the hard core stage following treatment of the peach (Prunus persica L.) fruit	NAA treatment	downregulated	29236054
446	Peach	ppe-miR398	miRNA	synthetic auxin ¦Á-naphthylacetic acid (NAA)	fruit development	mesocarp at the hard core stage following treatment of the peach (Prunus persica L.) fruit	NAA treatment	upregulated	29236054
447	Peach	ppe-miR408b	miRNA	synthetic auxin ¦Á-naphthylacetic acid (NAA)	fruit development	mesocarp at the hard core stage following treatment of the peach (Prunus persica L.) fruit	NAA treatment	upregulated	29236054
448	Peach	ppe-miR482	miRNA	synthetic auxin ¦Á-naphthylacetic acid (NAA)	fruit development	mesocarp at the hard core stage following treatment of the peach (Prunus persica L.) fruit	NAA treatment	downregulated	29236054
449	Peach	ppe-miR535	miRNA	synthetic auxin ¦Á-naphthylacetic acid (NAA)	fruit development	mesocarp at the hard core stage following treatment of the peach (Prunus persica L.) fruit	NAA treatment	downregulated	29236054
450	Phaseolus vulgaris	gma-miR1157	miRNA	salt	salt stress	drought-tolerant bean cv. Yakutiye and drought-sensitive bean cv. Zulbiye	"surface sterilization in a solution containing 5% (v/v) hypochlorite for 5 min, and were grown hydroponically in pots containing 0.2L of 1/10 Hoagland¡¯s solution"	dysregulated	28955602
451	Phaseolus vulgaris	gma-miR159f-3p	miRNA	drought	drought resistance	common bean (Phaseolus vulgaris L.)	drought treatments	dysregulated	28711666
452	Phaseolus vulgaris	gma-miR169u	miRNA	drought	drought resistance	common bean (Phaseolus vulgaris L.)	drought treatments	dysregulated	28711666
453	Phaseolus vulgaris	gma-miR396f	miRNA	drought	drought resistance	common bean (Phaseolus vulgaris L.)	drought treatments	dysregulated	28711666
454	Phaseolus vulgaris	gma-miR4415a-3p	miRNA	drought	drought resistance	common bean (Phaseolus vulgaris L.)	drought treatments	dysregulated	28711666
455	Phaseolus vulgaris	gma-miR5286	miRNA	salt	salt stress	drought-tolerant bean cv. Yakutiye and drought-sensitive bean cv. Zulbiye	"surface sterilization in a solution containing 5% (v/v) hypochlorite for 5 min, and were grown hydroponically in pots containing 0.2L of 1/10 Hoagland¡¯s solution"	dysregulated	28955602
456	Phaseolus vulgaris	gma-miR5660	miRNA	salt	salt stress	drought-tolerant bean cv. Yakutiye and drought-sensitive bean cv. Zulbiye	"surface sterilization in a solution containing 5% (v/v) hypochlorite for 5 min, and were grown hydroponically in pots containing 0.2L of 1/10 Hoagland¡¯s solution"	dysregulated	28955602
457	Phaseolus vulgaris	gma-miR5769	miRNA	salt	salt stress	drought-tolerant bean cv. Yakutiye and drought-sensitive bean cv. Zulbiye	"surface sterilization in a solution containing 5% (v/v) hypochlorite for 5 min, and were grown hydroponically in pots containing 0.2L of 1/10 Hoagland¡¯s solution"	dysregulated	28955602
458	Phaseolus vulgaris	gma-miR5770b	miRNA	drought	drought resistance	common bean (Phaseolus vulgaris L.)	drought treatments	dysregulated	28711666
459	Phaseolus vulgaris	gma-miR8120	miRNA	salt	salt stress	drought-tolerant bean cv. Yakutiye and drought-sensitive bean cv. Zulbiye	"surface sterilization in a solution containing 5% (v/v) hypochlorite for 5 min, and were grown hydroponically in pots containing 0.2L of 1/10 Hoagland¡¯s solution"	dysregulated	28955602
460	Pig	ssc-let-7b	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	innate immunity	porcine alveolar macrophages	infect with PRRSV treatment	upregulated	29387185
461	Pig	ssc-let-7b	miRNA	respiratory syndrome virus (PRRSV)	respiratory syndrome virus (PRRSV) infection	primary porcine alveolar macrophages (PAMs)	respiratory syndrome virus (PRRSV) treatment	upregulated	29387185
462	Pig	ssc-let-7f-5p	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	porcine reproductive and respiratory syndrome virus (PRRSV) infection	indigenous Chinese Tongcheng pigs alveolar macrophages	infect with PRRSV treatment	dysregulatedin alveolar macrophages	28971377
463	Pig	ssc-miR-1	miRNA	conjugated linoleic acid (CLA)	lipogenesis	pigs fat tissues	1.5% CLA to the pig diet	dysregulatedin fat tissues	29027986
464	Pig	ssc-miR-1	miRNA	sildenafil	ventricular fibrillation	cardiac	sildenafil treatment	"sildenafil treatment inhibited the increases in the microRNA-1 levels, but alleviated the decreases in the microRNA-133a levels"	26040988
465	Pig	ssc-miR-10a-5p	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	porcine reproductive and respiratory syndrome virus (PRRSV) infection	indigenous Chinese Tongcheng pigs alveolar macrophages	infect with PRRSV treatment	dysregulatedin alveolar macrophages	28971377
466	Pig	ssc-miR-122	miRNA	lipopolysaccharide (LPS)	gastrocnemius muscle inflammation	gastrocnemius muscle	lipopolysaccharide (LPS) treatment	downregulated	33232194
467	Pig	ssc-miR-124	miRNA	herpes simplex virus 2 (HSV-2)	genital herpes	epithelial tissues from guinea pigs	infect with HSV2	upregulated	28962197
468	Pig	ssc-miR-1245b-3p	miRNA	herpes simplex virus 2 (HSV-2)	genital herpes	epithelial tissues from guinea pigs	infect with HSV2	upregulated	28962197
469	Pig	ssc-miR-1245b-5p	miRNA	herpes simplex virus 2 (HSV-2)	genital herpes	epithelial tissues from guinea pigs	infect with HSV2	upregulated	28962197
470	Pig	ssc-miR-125b	miRNA	hyaluronan (HA)	acute cartilage injury	acute cartilage injury porcine	acute cartilage injury porcine treatment	upregulated	29986604
471	Pig	ssc-miR-125b-5p	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	porcine reproductive and respiratory syndrome virus (PRRSV) infection	indigenous Chinese Tongcheng pigs alveolar macrophages	infect with PRRSV treatment	dysregulatedin alveolar macrophages	28971377
472	Pig	ssc-miR-127	miRNA	3-isobutyl-1-methylxanthine (IBMX)-dexamethasone-insulin cocktail	adipogenesis	Porcine preadipocyte	3©\isobutyl©\1©\methylxanthine (IBMX)©\dexamethasone©\insulin cocktail treatment	miR-127 expression levels decreased during cell proliferation.	31206669
473	Pig	ssc-miR-127	miRNA	insulin	adipogenesis	Porcine preadipocyte	insulin treatment	"miR©\127 levels increased in the early period (days 0¨C2) of cell differentiation, before dropping dramatically."	31206669
474	Pig	ssc-miR-127	miRNA	cardio-pulmonary bypass (CPB)	lung injury	lung	cardiopulmonary bypass (CPB) treatment	dysregulated	25347932
475	Pig	ssc-miR-128	miRNA	dexamethasone (DEX)	abnormal lipid accumulation	pig preadipocytes	dexamethasone (Dex) treatment	upregulated	30394333
476	Pig	ssc-miR-128	miRNA	dexamethasone (DEX)	lipid accumulation	pig preadipocytes	dexamethasone (DEX) treatment	upregulated	30394333
477	Pig	ssc-miR-1307	miRNA	foot-and-mouth disease virus (FMDV)	foot-and-mouth disease (FMD)	porcine kidney cell line PK-15	foot-and-mouth disease virus (FMDV) infection	upregulated	31306911
478	Pig	ssc-miR-130a-3p	miRNA	brucella.suis	innate immune response	porcine alveolar macrophages (PAMs)	brucella.suis infection	upregulated	29387067
479	Pig	ssc-miR-130b	miRNA	dexamethasone (DEX)	lipid accumulation	porcine preadipocytes	dexamethasone (DEX) treatment	upregulated	29152131
480	Pig	ssc-miR-132	miRNA	lipopolysaccharide (LPS)	gastrocnemius muscle inflammation	gastrocnemius muscle	lipopolysaccharide (LPS) treatment	upregulated	33232194
481	Pig	ssc-miR-132	miRNA	ochratoxin A (OTA)	toxic effects in renal proximal tubular epithelial cells	porcine renal proximal tubular cells	Ochratoxin A (OTA) treatment	upregulated	23281030
482	Pig	ssc-miR-133a	miRNA	sildenafil	ventricular fibrillation	cardiac	sildenafil treatment	"sildenafil treatment inhibited the increases in the microRNA-1 levels, but alleviated the decreases in the microRNA-133a levels"	26040988
483	Pig	ssc-miR-135a	miRNA	lipopolysaccharide (LPS)	gastrocnemius muscle inflammation	gastrocnemius muscle	lipopolysaccharide (LPS) treatment	downregulated	33232194
484	Pig	ssc-miR-136	miRNA	coronary microembolization (CME)	"proliferation, apoptosis, coronary microembolization"	Bama mini-pigs	CME treatment	downregulated	28968594
485	Pig	ssc-miR-140	miRNA	hyaluronan (HA)	acute cartilage injury	acute cartilage injury porcine	acute cartilage injury porcine treatment	upregulated	29986604
486	Pig	ssc-miR-140-5p	miRNA	clostridium perfringens (C. perfringens) type C	piglet diarrhea	IPEC-J2 cells	Clostridium perfringens (C. perfringens) type C infection	ssc-miR-140-5p was significantly increased in piglets with diarrhea.	32905904
487	Pig	ssc-miR-142-3p	miRNA	coronary microembolization (CME)	"proliferation, apoptosis, coronary microembolization"	Bama mini-pigs	CME treatment	downregulated	28968594
488	Pig	ssc-miR-142-5p	miRNA	actinobacillus pleuropneumoniae	actinobacillus pleuropneumoniae infection	lung tissue	Actinobacillus pleuropneumoniae infection	downregulated	22953717
489	Pig	ssc-miR-143-3p	miRNA	actinobacillus pleuropneumoniae	actinobacillus pleuropneumoniae infection	lung tissue	Actinobacillus pleuropneumoniae infection	downregulated	22953717
490	Pig	ssc-miR-145	miRNA	lipopolysaccharide (LPS)	gastrocnemius muscle inflammation	gastrocnemius muscle	lipopolysaccharide (LPS) treatment	upregulated	33232194
491	Pig	ssc-miR-145	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	innate immunity	porcine alveolar macrophages	infect with PRRSV treatment	upregulated	29387185
492	Pig	ssc-miR-145	miRNA	cardio-pulmonary bypass (CPB)	lung injury	lung	cardiopulmonary bypass (CPB) treatment	dysregulated	25347932
493	Pig	ssc-miR-145	miRNA	respiratory syndrome virus (PRRSV)	respiratory syndrome virus (PRRSV) infection	primary porcine alveolar macrophages (PAMs)	respiratory syndrome virus (PRRSV) treatment	upregulated	29387185
494	Pig	ssc-miR-145-5p	miRNA	conjugated linoleic acid (CLA)	lipogenesis	pigs fat tissues	1.5% CLA to the pig diet	dysregulatedin fat tissues	29027986
495	Pig	ssc-miR-146a	miRNA	hyaluronan (HA)	acute cartilage injury	acute cartilage injury porcine	acute cartilage injury porcine treatment	upregulated	29986604
496	Pig	ssc-miR-146a	miRNA	IL-1¦Â	osteoarthritis (OA)	chondrocytes	IL-1¦Â treatment	upregulated	26505891
497	Pig	ssc-miR-146a	miRNA	brucella.suis	innate immune response	chondrocytes	brucella.suis infection	upregulated	29387067
498	Pig	ssc-miR-146a	miRNA	inflammatory cytokines	osteoarthritis (OA)	bone tissues	Inflammatory cytokines treatment	upregulated	26505891
499	Pig	ssc-miR-146a-5p	miRNA	conjugated linoleic acid (CLA)	lipogenesis	pigs fat tissues	1.5% CLA to the pig diet	dysregulatedin fat tissues	29027986
500	Pig	ssc-miR-146a-5p	miRNA	lipopolysaccharide (LPS)	skeletal muscle development and disease	weaned pig skeletal muscle	lipopolysaccharide (LPS) treatment	upregulated	26389897
501	Pig	ssc-miR-146b	miRNA	conjugated linoleic acid (CLA)	lipogenesis	pigs fat tissues	1.5% CLA to the pig diet	dysregulatedin fat tissues	29027986
502	Pig	ssc-miR-147	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	porcine reproductive and respiratory syndrome virus (PRRSV) infection	porcine alveolar macrophages (PAMs)	Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) infection treatment	downregulated	24339989
503	Pig	ssc-miR-148a	miRNA	actinobacillus pleuropneumoniae	actinobacillus pleuropneumoniae infection	lung tissue	Actinobacillus pleuropneumoniae infection	downregulated	22953717
504	Pig	ssc-miR-150	miRNA	herpes simplex virus 2 (HSV-2)	genital herpes	epithelial tissues from guinea pigs	infect with HSV2	upregulated	28962197
505	Pig	ssc-miR-150	miRNA	2-hydroxy-(4-methylthio)butanoic acid (HMB)	hyperhomocysteinemia (HHcy)	liver	2-hydroxy-(4-methylthio)butanoic acid (HMB) treatment	downregulated	27648945
506	Pig	ssc-miR-155-5p	miRNA	"1,25-dihydroxyvitamin D 3 (calcitriol)"	innate immune response	rotavirus (RV)-infected DLY pig jejunum tissues and IPEC-J2 cells	"1,25-dihydroxyvitamin D 3 (calcitriol) treatment"	downregulated	31330869
507	Pig	ssc-miR-155-5p	miRNA	rotavirus (RV)	innate immune response	DLY pig jejunum tissues and IPEC-J2 cells	rotavirus (RV) infection treatment	upregulated	31330869
508	Pig	ssc-miR-17-5pi	miRNA	vacuum sealing drainage (VSD)	seawater-immersed blast-injury wounds (SIBIW)	seawater-immersed blast-injury wounds (SIBIW) pigs SIBIW granulation tissues	VSD treatment	upregulated in SIBIW granulation tissues	28450946
509	Pig	ssc-miR-181	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	porcine reproductive and respiratory syndrome virus (PRRSV) infection	indigenous Chinese Tongcheng pigs alveolar macrophages	infect with PRRSV treatment	dysregulatedin alveolar macrophages	28971377
510	Pig	ssc-miR-181a	miRNA	TGF-¦Â3	chondrogenesis	peripheral blood mesenchymal stem cell (PBMSCs)	TGF-¦Â3 treatment	upregulated	31938188
511	Pig	ssc-miR-181a	miRNA	brucella.suis	innate immune response	porcine alveolar macrophages (PAMs)	brucella.suis infection	upregulated	29387067
512	Pig	ssc-miR-181b	miRNA	brucella.suis	innate immune response	porcine alveolar macrophages (PAMs)	brucella.suis infection	upregulated	29387067
513	Pig	ssc-miR-181d-5p	miRNA	2-hydroxy-(4-methylthio)butanoic acid (HMB)	hyperhomocysteinemia (HHcy)	liver	2-hydroxy-(4-methylthio)butanoic acid (HMB) treatment	downregulated	27648945
514	Pig	ssc-miR-183	miRNA	lipopolysaccharide (LPS)	oxidative stress	hippocampus	lipopolysaccharide (LPS) treatment	LPS-treated piglets had lower expression of miR-183.	32165261
515	Pig	ssc-miR-200c	miRNA	ochratoxin A (OTA)	toxic effects in renal proximal tubular epithelial cells	porcine renal proximal tubular cells	Ochratoxin A (OTA) treatment	upregulated	23281030
516	Pig	ssc-miR-204	miRNA	cardio-pulmonary bypass (CPB)	lung injury	lung	cardiopulmonary bypass (CPB) treatment	dysregulated	25347932
517	Pig	ssc-miR-205	miRNA	brain-derived neurotrophic factor (BDNF)	maturation of oocytes	oocytes	brain-derived neurotrophic factor (BDNF) treatment	downregulated	26838466
518	Pig	ssc-miR-206	miRNA	conjugated linoleic acid (CLA)	lipogenesis	pigs fat tissues	1.5% CLA to the pig diet	dysregulatedin fat tissues	29027986
519	Pig	ssc-miR-20a	miRNA	growth hormone releasing hormone (GHRH)	growth hormone (GH)?secretion regulation	Primary porcine anterior pituitary cells	were 10 nmol/L GHRH or 100 nmol/L CST treatment	downregulated	25613666
520	Pig	ssc-miR-21	miRNA	conjugated linoleic acid (CLA)	lipogenesis	pigs fat tissues	1.5% CLA to the pig diet	dysregulatedin fat tissues	29027986
521	Pig	ssc-miR-21	miRNA	cardio-pulmonary bypass (CPB)	lung injury	lung	cardiopulmonary bypass (CPB) treatment	dysregulated	25347932
522	Pig	ssc-miR-21	miRNA	ochratoxin A (OTA)	ochratoxin A (OTA) nephrotoxicity	LLC-PK1 cell line2	OTA treatment	upregulated	28089712
523	Pig	ssc-miR-22	miRNA	hyaluronan (HA)	acute cartilage injury	acute cartilage injury porcine	acute cartilage injury porcine treatment	upregulated	29986604
524	Pig	ssc-miR-22	miRNA	transmissible gastroenteritis virus (TGEV)	transmissible gastroenteritis (TGE)	porcine intestinal epithelial cell line (IPEC-J2)	TGEV infection treatment	mPTP opening of IPEC-J2 was occured during TGEV infection and suppressed by circEZH2 via attaching miR-22	31592229
525	Pig	ssc-miR-221-3p	miRNA	avian leukosis virus (ALV-J)	avian influenza virus (AIV) infection	porcine alveolar macrophage (PAM)	avian leukosis virus (ALV-J) inhection	downregulated	32907982
526	Pig	ssc-miR-221-5p	miRNA	lipopolysaccharide (LPS)	skeletal muscle development and disease	weaned pig skeletal muscle	lipopolysaccharide (LPS) treatment	upregulated	26389897
527	Pig	ssc-miR-222	miRNA	avian leukosis virus (ALV-J)	avian influenza virus (AIV) infection	porcine alveolar macrophage (PAM)	avian leukosis virus (ALV-J) inhection	downregulated	32907982
528	Pig	ssc-miR-222	miRNA	transmissible gastroenteritis virus (TGEV)	transmissible gastroenteritis virus (TGEV) infection	PK-15 cells	Transmissible gastroenteritis virus (TGEV) infection treatment	upregulated	30257878
529	Pig	ssc-miR-223	miRNA	selenium (Se)	vascular disease	aorta	Selenium (Se) treatment	Se deficiency in porcine arteries can induce inflammation through miR-223/NLRP3	33241567
530	Pig	ssc-miR-224	miRNA	lipopolysaccharide (LPS)	gastrocnemius muscle inflammation	gastrocnemius muscle	lipopolysaccharide (LPS) treatment	upregulated	33232194
531	Pig	ssc-miR-23-3p	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	porcine reproductive and respiratory syndrome virus (PRRSV) infection	indigenous Chinese Tongcheng pigs alveolar macrophages	infect with PRRSV treatment	dysregulatedin alveolar macrophages	28971377
532	Pig	ssc-miR-24-3p	miRNA	growth hormone releasing hormone (GHRH)	growth hormone (GH)?secretion regulation	Primary porcine anterior pituitary cells	were 10 nmol/L GHRH or 100 nmol/L CST treatment	downregulated	25613666
533	Pig	ssc-miR-26a	miRNA	growth hormone releasing hormone (GHRH)	growth hormone (GH)?secretion regulation	Primary porcine anterior pituitary cells	were 10 nmol/L GHRH or 100 nmol/L CST treatment	downregulated	25613666
534	Pig	ssc-miR-26a	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	innate immunity	porcine alveolar macrophages	infect with PRRSV treatment	upregulated	29387185
535	Pig	ssc-miR-26a	miRNA	respiratory syndrome virus (PRRSV)	respiratory syndrome virus (PRRSV) infection	primary porcine alveolar macrophages (PAMs)	respiratory syndrome virus (PRRSV) treatment	upregulated	29387185
536	Pig	ssc-miR-26a-5p	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	porcine reproductive and respiratory syndrome virus (PRRSV) infection	indigenous Chinese Tongcheng pigs alveolar macrophages	infect with PRRSV treatment	dysregulatedin alveolar macrophages	28971377
537	Pig	ssc-miR-27a	miRNA	leucine	skeletal muscle development	Porcine myoblasts	leucine treatment	downregulated	30449288
538	Pig	ssc-miR-27b	miRNA	hyaluronan (HA)	acute cartilage injury	acute cartilage injury porcine	acute cartilage injury porcine treatment	upregulated	29986604
539	Pig	ssc-miR-27b	miRNA	IL-1¦Â	osteoarthritis (OA)	chondrocytes	IL-1¦Â treatment	downregulated	26505891
540	Pig	ssc-miR-27b	miRNA	inflammatory cytokines	osteoarthritis (OA)	chondrocytes	Inflammatory cytokines treatment	upregulated	26505891
541	Pig	ssc-miR-296-3p	miRNA	2-hydroxy-(4-methylthio)butanoic acid (HMB)	hyperhomocysteinemia (HHcy)	liver	2-hydroxy-(4-methylthio)butanoic acid (HMB) treatment	downregulated	27648945
542	Pig	ssc-miR-29c	miRNA	ochratoxin A (OTA)	ochratoxin A (OTA) nephrotoxicity	LLC-PK1 cell line2	OTA treatment	downregulated	28089712
543	Pig	ssc-miR-301a-3p	miRNA	brucella.suis	innate immune response	porcine alveolar macrophages (PAMs)	brucella.suis infection	upregulated	29387067
544	Pig	ssc-miR-30c	miRNA	iohexol	contrast-induced acute kidney injury (CIAKI)	kidney tissues	iohexol treatment	upregulated	32682254
545	Pig	ssc-miR-30c-3p	miRNA	coronary microembolization (CME)	"proliferation, apoptosis, coronary microembolization"	Bama mini-pigs	CME treatment	upregulated	28968594
546	Pig	ssc-miR-323	miRNA	coronary microembolization (CME)	"proliferation, apoptosis, coronary microembolization"	Bama mini-pigs	CME treatment	upregulated	28968594
547	Pig	ssc-miR-338	miRNA	lipopolysaccharide (LPS)	porcine adrenal gland inflammation	adrenal gland tissues	lipopolysaccharide (LPS) treatment	Treatment with LPS alone extremely significantly decreased ssc-miR-338 levels.	32671106
548	Pig	ssc-miR-342-5p	miRNA	herpes simplex virus 2 (HSV-2)	genital herpes	epithelial tissues from guinea pigs	infect with HSV2	upregulated	28962197
549	Pig	ssc-miR-34a	miRNA	hyaluronan (HA)	acute cartilage injury	acute cartilage injury porcine	acute cartilage injury porcine treatment	upregulated	29986604
550	Pig	ssc-miR-34a	miRNA	lipopolysaccharide (LPS)	gastrocnemius muscle inflammation	gastrocnemius muscle	lipopolysaccharide (LPS) treatment	upregulated	33232194
551	Pig	ssc-miR-34a	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	innate immunity	porcine alveolar macrophages	infect with PRRSV treatment	upregulated	29387185
552	Pig	ssc-miR-34a	miRNA	respiratory syndrome virus (PRRSV)	respiratory syndrome virus (PRRSV) infection	primary porcine alveolar macrophages (PAMs)	respiratory syndrome virus (PRRSV) treatment	upregulated	29387185
553	Pig	ssc-miR-361-3p	miRNA	hypothalamic gonadotropin-releasing hormone (GnRH)	pituitary gonadotrope FSH secretion	pituitary cells	Hypothalamic gonadotropin-releasing hormone (GnRH)?treatment	downregulated	23451171
554	Pig	ssc-miR-370	miRNA	lipopolysaccharide (LPS)	gastrocnemius muscle inflammation	gastrocnemius muscle	lipopolysaccharide (LPS) treatment	downregulated	33232194
555	Pig	ssc-miR-370	miRNA	coronary microembolization (CME)	"proliferation, apoptosis, coronary microembolization"	Bama mini-pigs	CME treatment	upregulated	28968594
556	Pig	ssc-miR-374	miRNA	dexamethasone (DEX)	primary cultures of porcine adipocytes	primary porcine preadipocytes	dexamethasone (DEX) treatment	upregulated	23468252
557	Pig	ssc-miR-376a-5p	miRNA	coronary microembolization (CME)	"proliferation, apoptosis, coronary microembolization"	Bama mini-pigs	CME treatment	upregulated	28968594
558	Pig	ssc-miR-378-3p	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	porcine reproductive and respiratory syndrome virus (PRRSV) infection	indigenous Chinese Tongcheng pigs alveolar macrophages	infect with PRRSV treatment	dysregulatedin alveolar macrophages	28971377
559	Pig	ssc-miR-425-3p	miRNA	coronary microembolization (CME)	"proliferation, apoptosis, coronary microembolization"	Bama mini-pigs	CME treatment	upregulated	28968594
560	Pig	ssc-miR-4331	miRNA	transmissible gastroenteritis virus (TGEV)	transmissible gastroenteritis virus (TGEV) infection	porcine kidney (PK-15) cells	infect with TGEV treatment	upregulated	29217619
561	Pig	ssc-miR-4331-5p	miRNA	foot-and-mouth disease virus (FMDV)	foot-and-mouth disease (FMD)	PK-15 cells	foot and mouth virus (FMDV) treatment	FMDV infection directly upregulates miR-4331-5p expression.	32574680
562	Pig	ssc-miR-491	miRNA	coronary microembolization (CME)	"proliferation, apoptosis, coronary microembolization"	Bama mini-pigs	CME treatment	upregulated	28968594
563	Pig	ssc-miR-493-5p	miRNA	coronary microembolization (CME)	"proliferation, apoptosis, coronary microembolization"	Bama mini-pigs	CME treatment	upregulated	28968594
564	Pig	ssc-miR-592	miRNA	herpes simplex virus 2 (HSV-2)	genital herpes	epithelial tissues from guinea pigs	infect with HSV2	upregulated	28962197
565	Pig	ssc-miR-874	miRNA	coronary microembolization (CME)	"proliferation, apoptosis, coronary microembolization"	Bama mini-pigs	CME treatment	upregulated	28968594
566	Pig	ssc-miR-92b-5p	miRNA	coronary microembolization (CME)	"proliferation, apoptosis, coronary microembolization"	Bama mini-pigs	CME treatment	upregulated	28968594
567	Pig	ssc-miR-c89	miRNA	porcine reproductive and respiratory syndrome virus (PRRSV)	porcine reproductive and respiratory syndrome virus (PRRSV) infection	porcine alveolar macrophages (PAMs)	porcine reproductive and respiratory syndrome virus (PRRSV) infection treatment	upregulated	31478827
568	Pig	ssc-miR-106-5p	miRNA	lipopolysaccharide (LPS)	bacterial-induced endometritis	sow endometrial epithelial cells (EECs)	lipopolysaccharide (LPS) treatment	downregulated	31242957
569	Pig	ssc-miR-1249	miRNA	lipopolysaccharide (LPS)	bacterial-induced endometritis	sow endometrial epithelial cells (EECs)	lipopolysaccharide (LPS) treatment	upregulated	31242957
570	Pig	ssc-miR-127	miRNA	lipopolysaccharide (LPS)	bacterial-induced endometritis	sow endometrial epithelial cells (EECs)	lipopolysaccharide (LPS) treatment	downregulated	31242957
571	Pig	ssc-miR-199a-3p	miRNA	lipopolysaccharide (LPS)	bacterial-induced endometritis	sow endometrial epithelial cells (EECs)	lipopolysaccharide (LPS) treatment	downregulated	31242957
572	Pig	ssc-miR-199a-5p	miRNA	lipopolysaccharide (LPS)	bacterial-induced endometritis	sow endometrial epithelial cells (EECs)	lipopolysaccharide (LPS) treatment	downregulated	31242957
573	Pig	ssc-miR-199b-3p	miRNA	lipopolysaccharide (LPS)	bacterial-induced endometritis	sow endometrial epithelial cells (EECs)	lipopolysaccharide (LPS) treatment	downregulated	31242957
574	Pig	ssc-miR-199b-5p	miRNA	lipopolysaccharide (LPS)	bacterial-induced endometritis	sow endometrial epithelial cells (EECs)	lipopolysaccharide (LPS) treatment	downregulated	31242957
575	Pig	ssc-miR-370	miRNA	lipopolysaccharide (LPS)	bacterial-induced endometritis	sow endometrial epithelial cells (EECs)	lipopolysaccharide (LPS) treatment	downregulated	31242957
576	Pig	ssc-miR-493-5p	miRNA	lipopolysaccharide (LPS)	bacterial-induced endometritis	sow endometrial epithelial cells (EECs)	lipopolysaccharide (LPS) treatment	downregulated	31242957
577	Pig	ssc-miR-758	miRNA	lipopolysaccharide (LPS)	bacterial-induced endometritis	sow endometrial epithelial cells (EECs)	lipopolysaccharide (LPS) treatment	downregulated	31242957
578	Pig	ssc-miR-140	miRNA	classical swine fever virus (CSFV)	classical swine fever virus (CSFV) infection	swine umbilical vein endothelial cells (SUVEC)	Classical swine fever virus (CSFV) infection	downregulated	32114898
579	Podophyllum	she-miR1438	miRNA	methyl jasmonate (MeJA)	oxygen species (ROS)	podophyllum hexandrum	methyl jasmonate (MeJA) treatment	downregulated	28261233
580	Podophyllum	she-miR172i	miRNA	methyl jasmonate (MeJA)	oxygen species (ROS)	podophyllum hexandrum	methyl jasmonate (MeJA) treatment	downregulated	28261233
581	Podophyllum	she-miR2275	miRNA	methyl jasmonate (MeJA)	oxygen species (ROS)	podophyllum hexandrum	methyl jasmonate (MeJA) treatment	downregulated	28261233
582	Podophyllum	she-miR35	miRNA	methyl jasmonate (MeJA)	oxygen species (ROS)	podophyllum hexandrum	methyl jasmonate (MeJA) treatment	downregulated	28261233
583	Podophyllum	she-miR8291	miRNA	methyl jasmonate (MeJA)	oxygen species (ROS)	podophyllum hexandrum	methyl jasmonate (MeJA) treatment	downregulated	28261233
584	Populus	pto-miR156k	miRNA	cold	populus under cold stress	Populus plantlets	Populus plantlets grown in vitro were treated with cold (4 ¡ãC for 8 h)	downregulated	30912003
585	Populus	pto-miR167a-d	miRNA	cold	populus under cold stress	Populus plantlets	Populus plantlets grown in vitro were treated with cold (4 ¡ãC for 8 h)	upregulated	30912003
586	Populus	pto-miR167f/g	miRNA	cold	populus under cold stress	Populus plantlets	Populus plantlets grown in vitro were treated with cold (4 ¡ãC for 8 h)	upregulated	30912003
587	Populus	pto-miR169i-m	miRNA	cold	populus under cold stress	Populus plantlets	Populus plantlets grown in vitro were treated with cold (4 ¡ãC for 8 h)	downregulated	30912003
588	Populus	pto-miR394a-5p/b-5p	miRNA	cold	populus under cold stress	Populus plantlets	Populus plantlets grown in vitro were treated with cold (4 ¡ãC for 8 h)	downregulated	30912003
589	Populus tomentosa	ptc-miR6437a	miRNA	indole-3-acetic acid (IAA)	growth of P. tomentosa	1-year-old poplar clones	indole-3-acetic acid (IAA) treatment	upregulated	31324970
590	Pyrus?pyrifolia	pyr-miR156a	miRNA	bagging treatments	red peel coloration and anthocyanin accumulation	Red Chinese sand pear (Pyrus pyrifolia) fruits	bagging treatments	downregulated	28824447
591	Pyrus?pyrifolia	pyr-miR156ba	miRNA	bagging treatments	red peel coloration and anthocyanin accumulation	Red Chinese sand pear (Pyrus pyrifolia) fruits	bagging treatments	downregulated	28824447
592	Pyrus?pyrifolia	pyr-miR156g	miRNA	bagging treatments	red peel coloration and anthocyanin accumulation	Red Chinese sand pear (Pyrus pyrifolia) fruits	bagging treatments	downregulated	28824447
593	Pyrus?pyrifolia	pyr-miR156s	miRNA	bagging treatments	red peel coloration and anthocyanin accumulation	Red Chinese sand pear (Pyrus pyrifolia) fruits	bagging treatments	downregulated	28824447
594	Pyrus?pyrifolia	pyr-miR156sa	miRNA	bagging treatments	red peel coloration and anthocyanin accumulation	Red Chinese sand pear (Pyrus pyrifolia) fruits	bagging treatments	downregulated	28824447
595	Rabbit	ocu-miR-133	miRNA	Krebs-Henseleit solution with 1 ?mol L(-1) atrial natriuretic peptide	myocardial reperfusion injury	rabbit heart tissues	Krebs-Henseleit solution with 1 ?mol L(-1) atrial natriuretic peptide treatment	upregulated	24585906
596	Rabbit	ocu-miR-133b-3p	miRNA	glucocorticoid (GC)	non-traumatic osteonecrosis of femoral head (ONFH)	bone marrow mesenchymal stem cells (BMMSCs)	glucocorticoid treatment	downregulated	33176873
597	Rabbit	ocu-miR-182	miRNA	N-methyl-D-aspartate (NMDA)	inner retinal injury	plasma	N-methyl-D-aspartate (NMDA) treatment	"Compared to pre-dosing values, the plasma levels at 4 hr after dosing with NMDA were significantly higher both for miR-182 (P < 0.05) and miR-183."	32404558
598	Rabbit	ocu-miR-183	miRNA	N-methyl-D-aspartate (NMDA)	inner retinal injury	plasma	N-methyl-D-aspartate (NMDA) treatment	"Compared to pre-dosing values, the plasma levels at 4 hr after dosing with NMDA were significantly higher both for miR-182 (P < 0.05) and miR-183."	32404558
599	Rabbit	ocu-miR-20a	miRNA	naringin	osteoblastic differentiation and inhibition of adipocyte formation	bone marrow stem cells	Naringin treatment	upregulated	26126997
600	Rabbit	ocu-miR-26b	miRNA	leptin	Alzheimer's disease (AD)	Frontal Cortex tissues	cholesterol fed rabbit model for AD treatment	upregulated	24754001
601	Rabbit	ocu-miR-451-5p	miRNA	glucocorticoid (GC)	non-traumatic osteonecrosis of femoral head (ONFH)	bone marrow mesenchymal stem cells (BMMSCs)	glucocorticoid treatment	upregulated	33176873
602	Rainbow trout	omy-miR-122b	miRNA	insulin	postprandial lipogenesis	rainbow trout liver cells	insulin treatment	upregulated	24333236
603	Rainbow trout	omy-miR-133	miRNA	estradiol-17¦Â (E2)	apoptosis	juvenile rainbow trout	estradiol-17¦Â (E2) treatment	upregulated	28011237
604	Rainbow trout	omy-miR-145	miRNA	estradiol-17¦Â (E2)	apoptosis	juvenile rainbow trout	estradiol-17¦Â (E2) treatment	downregulated	28011237
605	Rainbow trout	omy-miR-206	miRNA	estradiol-17¦Â (E2)	apoptosis	juvenile rainbow trout	estradiol-17¦Â (E2) treatment	upregulated	28011237
606	Rainbow trout	omy-miR-499	miRNA	estradiol-17¦Â (E2)	apoptosis	juvenile rainbow trout	estradiol-17¦Â (E2) treatment	downregulated	28011237
607	rainbow trout	omy-mir-122	miRNA	insulin	hepatic lipogenesis	rainbow trout hepatocytes	Insulin treatment	upregulation	24333236
608	Rhesus monkey	mml-miR-10a	miRNA	¦¤9-tetrahydrocannabinol (THC)	intestinal inflammation	Proximal duodenal	¦¤9-tetrahydrocannabinol (¦¤9-THC) treatment	upregulated	25378491
609	Rhesus monkey	mml-miR-145	miRNA	¦¤9-tetrahydrocannabinol (THC)	intestinal inflammation	Proximal duodenal	¦¤9-tetrahydrocannabinol (¦¤9-THC) treatment	upregulated	25378491
610	Rhesus monkey	mml-miR-149	miRNA	¦¤9-tetrahydrocannabinol (THC)	intestinal inflammation	Proximal duodenal	¦¤9-tetrahydrocannabinol (¦¤9-THC) treatment	upregulated	25378491
611	Rhesus monkey	mml-miR-187	miRNA	¦¤9-tetrahydrocannabinol (THC)	intestinal inflammation	Proximal duodenal	¦¤9-tetrahydrocannabinol (¦¤9-THC) treatment	upregulated	25378491
612	Rhesus monkey	mml-miR-24	miRNA	¦¤9-tetrahydrocannabinol (THC)	intestinal inflammation	Proximal duodenal	¦¤9-tetrahydrocannabinol (¦¤9-THC) treatment	upregulated	25378491
613	Rhesus monkey	mml-miR-99b	miRNA	¦¤9-tetrahydrocannabinol (THC)	intestinal inflammation	Proximal duodenal	¦¤9-tetrahydrocannabinol (¦¤9-THC) treatment	upregulated	25378491
614	Rhesus monkey	mml-miR-126	miRNA	¦Ã-rays	tissue toxicity of radiation	male and female rhesus macaques (Macaca mulatta) NHPs	¦Ã-rays treatment	"downregulated (miR-126, miR-144, miR-21) and upregulation( miR-1-3p , miR-206 )"	27907140
615	Rhesus monkey	mml-miR-1-3p	miRNA	¦Ã-rays	tissue toxicity of radiation	male and female rhesus macaques (Macaca mulatta) NHPs	¦Ã-rays treatment	"downregulated (miR-126, miR-144, miR-21) and upregulation( miR-1-3p , miR-206 )"	27907140
616	Rhesus monkey	mml-miR-144	miRNA	¦Ã-rays	tissue toxicity of radiation	male and female rhesus macaques (Macaca mulatta) NHPs	¦Ã-rays treatment	"downregulated (miR-126, miR-144, miR-21) and upregulation( miR-1-3p , miR-206 )"	27907140
617	Rhesus monkey	mml-miR-206	miRNA	¦Ã-rays	tissue toxicity of radiation	male and female rhesus macaques (Macaca mulatta) NHPs	¦Ã-rays treatment	"downregulated (miR-126, miR-144, miR-21) and upregulation( miR-1-3p , miR-206 )"	27907140
618	Rhesus monkey	mml-miR-21	miRNA	¦Ã-rays	tissue toxicity of radiation	male and female rhesus macaques (Macaca mulatta) NHPs	¦Ã-rays treatment	"downregulated (miR-126, miR-144, miR-21) and upregulation( miR-1-3p , miR-206 )"	27907140
619	Rhesus monkey	mml-miR-574-5p	miRNA	¦Ã-rays	tissue toxicity of radiation	male and female rhesus macaques (Macaca mulatta) NHPs	¦Ã-rays treatment	upregulated	27907140
620	Rhesus monkey	mml-let-7f	miRNA	simian immunodeficiency virus (SIV)	acquired Immune Deficiency Syndrome (AIDS)	Adult male rhesus macaques	infect with SIV treatment	downregulated	24672033
621	Rhesus monkey	mml-miR-143	miRNA	simian immunodeficiency virus (SIV)	acquired Immune Deficiency Syndrome (AIDS)	Adult male rhesus macaques	infect with SIV treatment	downregulated	24672033
622	Rhesus monkey	mml-miR-145	miRNA	simian immunodeficiency virus (SIV)	acquired Immune Deficiency Syndrome (AIDS)	Adult male rhesus macaques	infect with SIV treatment	downregulated	24672033
623	Rhesus monkey	mml-miR-194	miRNA	simian immunodeficiency virus (SIV)	acquired Immune Deficiency Syndrome (AIDS)	Adult male rhesus macaques	infect with SIV treatment	downregulated	24672033
624	Rhesus monkey	mml-miR-21	miRNA	simian immunodeficiency virus (SIV)	acquired Immune Deficiency Syndrome (AIDS)	Adult male rhesus macaques	infect with SIV treatment	downregulated	24672033
625	Rhesus monkey	mml-miR-10a	miRNA	¦¤9-tetrahydrocannabinol (THC)	intestinal inflammation	acute simian immunodeficiency virus infection of rhesus macaques	¦¤9-THC treatment	upregulated	25378491
626	Rhesus monkey	mml-miR-125a-5p	miRNA	calorie restriction (CR)	delayed aging	rhesus monkeys	calorie restriction (CR) treatment	downregulated	28677323
627	Rhesus monkey	mml-miR-130a	miRNA	simian immunodeficiency virus (SIV)	intestinal barrier dysfunction	colonic epithelium (CE)	Simian Immunodeficiency Virus (SIV) infection treatment	upregulated	29514950
628	Rhesus monkey	mml-miR-145	miRNA	¦¤9-tetrahydrocannabinol (THC)	intestinal inflammation	acute simian immunodeficiency virus infection of rhesus macaques	¦¤9-THC treatment	upregulated	25378491
629	Rhesus monkey	mml-miR-149	miRNA	¦¤9-tetrahydrocannabinol (THC)	intestinal inflammation	acute simian immunodeficiency virus infection of rhesus macaques	¦¤9-THC treatment	upregulated	25378491
630	Rhesus monkey	mml-miR-155	miRNA	alcohol	hyperglycemia-induced beta-cell dysfunction	colon tissues	chronic alcohol administration	upregulated	24329418
631	Rhesus monkey	mml-miR-155	miRNA	alcohol	systemic and mucosal infections	"rhesus macaques colon,PBMC"	chronic alcohol administration	upregulated	24329418
632	Rhesus monkey	mml-miR-181a	miRNA	alcohol	both systemic and mucosal infections	PBMC	chronic alcohol administration	upregulated	24329418
633	Rhesus monkey	mml-miR-181a	miRNA	alcohol	systemic and mucosal infections	"rhesus macaques colon,PBMC"	chronic alcohol administration	upregulated	24329418
634	Rhesus monkey	mml-miR-187	miRNA	¦¤9-tetrahydrocannabinol (THC)	intestinal inflammation	acute simian immunodeficiency virus infection of rhesus macaques	¦¤9-THC treatment	upregulated	25378491
635	Rhesus monkey	mml-miR-206	miRNA	simian immunodeficiency virus (SIV)	simian immunodeficiency virus (SIV) infection	Indian-derived male rhesus macaques myoblasts	infect with SIV treatment	downregulated in myoblasts	28637658
636	Rhesus monkey	mml-miR-206	miRNA	simian immunodeficiency virus (SIV)	simian immunodeficiency virus (SIV) infection	Indian-derived male rhesus macaques plasma and muscle	daily 30-min intragastric infusions of alcohol and infect with SIV treatment	downregulated in plasma and muscle	28637658
637	Rhesus monkey	mml-miR-212	miRNA	simian immunodeficiency virus (SIV)	intestinal barrier dysfunction	colonic epithelium (CE)	Simian Immunodeficiency Virus (SIV) infection treatment	upregulated	29514950
638	Rhesus monkey	mml-miR-221	miRNA	alcohol	both systemic and mucosal infections	PBMC	chronic alcohol administration	upregulated	24329418
639	Rhesus monkey	mml-miR-221	miRNA	alcohol	systemic and mucosal infections	"rhesus macaques colon,PBMC"	chronic alcohol administration	upregulated	24329418
640	Rhesus monkey	mml-miR-24	miRNA	¦¤9-tetrahydrocannabinol (THC)	intestinal inflammation	acute simian immunodeficiency virus infection of rhesus macaques	¦¤9-THC treatment	upregulated	25378491
641	Rhesus monkey	mml-miR-6790	miRNA	environmental tobacco smoke (ETS)	age-related macular degeneration (AMD)	plasma	environmental tobacco smoke (ETS) treatment	downregulated	30294202
642	Rhesus monkey	mml-miR-6794	miRNA	environmental tobacco smoke (ETS)	age-related macular degeneration (AMD)	plasma	environmental tobacco smoke (ETS) treatment	downregulated	30294202
643	Rhesus monkey	mml-miR-7	miRNA	rotavirus (RV)	rotavirus (RV) infection	MA104 cells	Rotavirus (RV) infection treatment	miR-7 is upregulated during Rotavirus (RV) replication	32069901
644	Rhesus monkey	mml-miR-99b	miRNA	¦¤9-tetrahydrocannabinol (THC)	intestinal inflammation	acute simian immunodeficiency virus infection of rhesus macaques	¦¤9-THC treatment	upregulated	25378491
645	Rice	osa-miR1425	miRNA	heat stress	oxidative stress	tolerant (Nagina 22) and susceptible (Vandana) rice cultivars	short and prolonged heat stress and recovery	upregulated	28407080
646	Rice	osa-miR1439	miRNA	heat stress	oxidative stress	tolerant (Nagina 22) rice cultivars	short and prolonged heat stress and recovery	dysregulated	28407080
647	Rice	osa-miR159a	miRNA	hydrogen gas (H2)	aluminum (Al) toxicity	germinating rice seeds treated with aluminum (Al)	H2	"compared with Al alone, transcripts of miR-398a and miR-159a were downregulated by H2"	28756251
648	Rice	osa-miR159f	miRNA	drought	cultivar-specific drought responsive (CSDR)	rice	drought treatments	upregulated	29133823
649	Rice	osa-miR162	miRNA	heat stress	oxidative stress	tolerant (Nagina 22) and susceptible (Vandana) rice cultivars	short and prolonged heat stress and recovery	upregulated	28407080
650	Rice	osa-miR164a	miRNA	magnaporthe oryzae strain Guy11	magnaporthe oryzae (M. oryzae) infection	rice	magnaporthe oryzae strain Guy11 infection	osa-miR164a expression reduced upon Guy11 infection at both early and late stages.	29775494
651	Rice	osa-miR166	miRNA	heat stress	oxidative stress	tolerant (Nagina 22) and susceptible (Vandana) rice cultivars	short and prolonged heat stress and recovery	upregulated	28407080
652	Rice	osa-miR167d	miRNA	magnaporthe oryzae (M. oryzae)	magnaporthe oryzae (M. oryzae) infection	rice	M. oryzae infection	"The expression of Osa-miR167d was significantly suppressed in a resistant accession at and after 24?h post inoculation (hpi), however, its expression was significantly increased at 24 hpi in the susceptible accession upon M. oryzae infection."	31001874
653	Rice	osa-miR168	miRNA	heat stress	oxidative stress	tolerant (Nagina 22) and susceptible (Vandana) rice cultivars	short and prolonged heat stress and recovery	upregulated	28407080
654	Rice	osa-miR171	miRNA	chromium (Cr)	signalling pathway in rice during Cr stress	rice	chromium (Cr) treatment	"miR171 was downregulated after 7h treatment by chromium (Cr), while it was upregulated after prolonged Cr exposure (7 days)."	31792790
655	Rice	osa-miR1848	miRNA	heat stress	oxidative stress	tolerant (Nagina 22) rice cultivars	short and prolonged heat stress and recovery	dysregulated	28407080
656	Rice	osa-miR1862	miRNA	heat stress	oxidative stress	tolerant (Nagina 22) and susceptible (Vandana) rice cultivars	short and prolonged heat stress and recovery	upregulated	28407080
657	Rice	osa-miR1871	miRNA	drought	cultivar-specific drought responsive (CSDR)	rice	drought treatments	upregulated	29133823
658	Rice	osa-miR1876	miRNA	heat stress	oxidative stress	tolerant (Nagina 22) and susceptible (Vandana) rice cultivars	short and prolonged heat stress and recovery	upregulated	28407080
659	Rice	osa-miR1883	miRNA	chromium (Cr)	signalling pathway in rice during Cr stress	rice	chromium (Cr) treatment	osa-miR1883 was was significantly decreased immediately after Cr exposure (24 h).	31792790
660	Rice	osa-miR2096	miRNA	heat stress	oxidative stress	tolerant (Nagina 22) rice cultivars	short and prolonged heat stress and recovery	dysregulated	28407080
661	Rice	osa-miR2106	miRNA	heat stress	oxidative stress	tolerant (Nagina 22) rice cultivars	short and prolonged heat stress and recovery	dysregulated	28407080
662	Rice	osa-MIR268	miRNA	cadmium (Cd)	cadmium stress	seedlings	cadmium (Cd) treatment	upregulated	28657742
663	Rice	osa-miR2875	miRNA	heat stress	oxidative stress	tolerant (Nagina 22) rice cultivars	short and prolonged heat stress and recovery	dysregulated	28407080
664	Rice	osa-miR2878-5p	miRNA	drought	cultivar-specific drought responsive (CSDR)	rice	drought treatments	upregulated	29133823
665	Rice	osa-miR396	miRNA	chromium (Cr)	signalling pathway in rice during Cr stress	rice	chromium (Cr) treatment	osa-miR396 was was significantly increased immediately after Cr exposure (24 h) and significantly reduced after prolonged Cr exposure (7 days).	31792790
666	Rice	osa-miR397a	miRNA	drought	cultivar-specific drought responsive (CSDR)	rice	drought treatments	upregulated	29133823
667	Rice	osa-miR3981	miRNA	heat stress	oxidative stress	tolerant (Nagina 22) rice cultivars	short and prolonged heat stress and recovery	dysregulated	28407080
668	Rice	osa-miR398a	miRNA	hydrogen gas (H2)	aluminum (Al) toxicity	germinating rice seeds treated with aluminum (Al)	H2	"compared with Al alone, transcripts of miR-398a and miR-159a were downregulated by H2"	28756251
669	Rice	osa-miR398b	miRNA	drought	cultivar-specific drought responsive (CSDR)	rice	drought treatments	upregulated	29133823
670	Rice	osa-miR408-3p	miRNA	drought	cultivar-specific drought responsive (CSDR)	rice	drought treatments	upregulated	29133823
671	Rice	osa-miR5072	miRNA	chromium (Cr)	signalling pathway in rice during Cr stress	rice	chromium (Cr) treatment	osa-miR5072 was was significantly increased immediately after Cr exposure (24 h) and significantly reduced after prolonged Cr exposure (7 days).	31792790
672	Rice	osa-miR5079	miRNA	heat stress	oxidative stress	tolerant (Nagina 22) rice cultivars	short and prolonged heat stress and recovery	dysregulated	28407080
673	Rice	osa-miR5151	miRNA	heat stress	oxidative stress	tolerant (Nagina 22) rice cultivars	short and prolonged heat stress and recovery	dysregulated	28407080
674	Rice	osa-miR528-5p	miRNA	drought	cultivar-specific drought responsive (CSDR)	rice	drought treatments	upregulated	29133823
675	Rice	osa-miR529	miRNA	heat stress	oxidative stress	tolerant (Nagina 22) and susceptible (Vandana) rice cultivars	short and prolonged heat stress and recovery	upregulated	28407080
676	Rice	osa-miR5484	miRNA	heat stress	oxidative stress	tolerant (Nagina 22) rice cultivars	short and prolonged heat stress and recovery	dysregulated	28407080
677	Rice	osa-miR5485	miRNA	drought	drought resistance	"rice lines with contrasting levels of drought tolerance: IR77298-14-1-2-10, IR87705-7-15-B , IR64"	plants at booting stage by discontinuing watering	dysregulated	29045473
678	Rice	osa-miR5487	miRNA	drought	drought resistance	"rice lines with contrasting levels of drought tolerance: IR77298-14-1-2-10, IR87705-7-15-B , IR64"	plants at booting stage by discontinuing watering	dysregulated	29045473
679	Rice	osa-miR5492	miRNA	drought	drought resistance	"rice lines with contrasting levels of drought tolerance: IR77298-14-1-2-10, IR87705-7-15-B , IR64"	plants at booting stage by discontinuing watering	dysregulated	29045473
680	Rice	osa-miR5517	miRNA	drought	drought resistance	"rice lines with contrasting levels of drought tolerance: IR77298-14-1-2-10, IR87705-7-15-B , IR64"	plants at booting stage by discontinuing watering	dysregulated	29045473
681	Rice	osa-miR5792	miRNA	heat stress	oxidative stress	tolerant (Nagina 22) rice cultivars	short and prolonged heat stress and recovery	dysregulated	28407080
682	Rice	osa-miR5812	miRNA	heat stress	oxidative stress	tolerant (Nagina 22) rice cultivars	short and prolonged heat stress and recovery	dysregulated	28407080
683	Rubber tree	hbr-miR159	miRNA	ethylene	bark dryness syndrome	bark of rubber tree	ethylene treatment	downregulated	25289520
684	Rubber tree	hbr-miR166	miRNA	ethylene	bark dryness syndrome	bark of rubber tree	ethylene treatment	downregulated	25289520
685	Schistosoma japonicum	sja-miR-2162	miRNA	schistosoma japonicum	liver fibrosis	hepatic stellate cells (HSCs)	Schistosoma japonicum (S. japonicum) infection treatment	upregulated	31738999
686	Schistosoma japonicum	sja-miR-2162	miRNA	schistosoma japonicum	liver fibrosis	hepatic stellate cells 52 (HSCs)	schistosoma japonicum (S. japonicum) infection treatment	upregulated	31738999
687	Sheep	oar-miR-1246	miRNA	peste des petits ruminants virus (PPRV)	peste des petits ruminants (PPR) virus infection	sheep lung and spleen	infect with PPR treatment	dysregulated in lung and spleen	28694795
688	Sheep	oar-miR-125a-5p	miRNA	heart failure (HF) surgery	heart failure (HF)	ovine left ventricular (LV) tissue	7 French His-bundle electrode was implanted subepicardially in the LV wall for subsequent pacing	upregulated in left ventricular (LV) tissue	28811555
689	Sheep	oar-miR-125b-5p	miRNA	heart failure (HF) surgery	heart failure (HF)	ovine left ventricular (LV) tissue	7 French His-bundle electrode was implanted subepicardially in the LV wall for subsequent pacing	upregulated in left ventricular (LV) tissue	28811555
690	Sheep	oar-miR-126-3p	miRNA	heart failure (HF) surgery	heart failure (HF)	ovine left ventricular (LV) tissue	7 French His-bundle electrode was implanted subepicardially in the LV wall for subsequent pacing	upregulated in left ventricular (LV) tissue	28811555
691	Sheep	oar-miR-133b-3p	miRNA	heart failure (HF) surgery	heart failure (HF)	ovine left ventricular (LV) tissue	7 French His-bundle electrode was implanted subepicardially in the LV wall for subsequent pacing	upregulated in left ventricular (LV) tissue	28811555
692	Sheep	oar-miR-208b-3p	miRNA	heart failure (HF) surgery	heart failure (HF)	ovine left ventricular (LV) tissue	7 French His-bundle electrode was implanted subepicardially in the LV wall for subsequent pacing	upregulated in left ventricular (LV) tissue	28811555
693	Sheep	oar-miR-210	miRNA	hypoxia	preeclampsia (PE)	pregnant sheep uterine arteries	maintain at low altitude or exposed to high altitude hypoxia for 110 days	upregulated	28739977
694	Sheep	oar-miR-210-3p	miRNA	heart failure (HF) surgery	heart failure (HF)	ovine left ventricular (LV) tissue	7 French His-bundle electrode was implanted subepicardially in the LV wall for subsequent pacing	upregulated in left ventricular (LV) tissue	28811555
695	Sheep	oar-miR-21-3p	miRNA	peste des petits ruminants virus (PPRV)	peste des petits ruminants (PPR) virus infection	sheep lung and spleen	infect with PPR treatment	dysregulated in lung and spleen	28694795
696	Sheep	oar-miR-21-5p	miRNA	heart failure (HF) surgery	heart failure (HF)	ovine left ventricular (LV) tissue	7 French His-bundle electrode was implanted subepicardially in the LV wall for subsequent pacing	upregulated in left ventricular (LV) tissue	28811555
697	Sheep	oar-miR-27a-5p	miRNA	peste des petits ruminants virus (PPRV)	peste des petits ruminants (PPR) virus infection	sheep lung and spleen	infect with PPR treatment	dysregulated in lung and spleen	28694795
698	Sheep	oar-miR-29a-3p	miRNA	heart failure (HF) surgery	heart failure (HF)	ovine left ventricular (LV) tissue	7 French His-bundle electrode was implanted subepicardially in the LV wall for subsequent pacing	upregulated in left ventricular (LV) tissue	28811555
699	Sheep	oar-miR-320a	miRNA	heart failure (HF) surgery	heart failure (HF)	ovine left ventricular (LV) tissue	7 French His-bundle electrode was implanted subepicardially in the LV wall for subsequent pacing	upregulated in left ventricular (LV) tissue	28811555
700	Sheep	oar-miR-320a	miRNA	peste des petits ruminants virus (PPRV)	peste des petits ruminants (PPR) virus infection	sheep lung and spleen	infect with PPR treatment	dysregulated in lung and spleen	28694795
701	Sheep	oar-miR-363	miRNA	peste des petits ruminants virus (PPRV)	peste des petits ruminants (PPR) virus infection	sheep lung and spleen	infect with PPR treatment	dysregulated in lung and spleen	28694795
702	Sheep	oar-miR-494-3p	miRNA	heart failure (HF) surgery	heart failure (HF)	ovine left ventricular (LV) tissue	7 French His-bundle electrode was implanted subepicardially in the LV wall for subsequent pacing	upregulated in left ventricular (LV) tissue	28811555
703	Sheep	oar-miR-760-3p	miRNA	peste des petits ruminants virus (PPRV)	peste des petits ruminants (PPR) virus infection	sheep lung and spleen	infect with PPR treatment	dysregulated in lung and spleen	28694795
704	Soybean	gma-miR169c	miRNA	high N	soybean nodulation	soybean	high N treatment	miR169c expression was induced by high N treatment.	33245793
705	Soybean	gso-miR156hk-3p	miRNA	salt	salt stress	soybean	salt stress treatment	upregulated	32947244
706	Soybean	gso-miR156hk-3p	miRNA	polyethylene glycol	salt stress	soybean	Polyethylene glycol treatment	downregulated	32947244
707	Soybean	gso-miR166i-5p	miRNA	polyethylene glycol	salt stress	soybean	Polyethylene glycol treatment	downregulated	32947244
708	Soybean	gso-miR319b-5p	miRNA	salt	salt stress	soybean	salt stress treatment	upregulated	32947244
709	Soybean	gso-miR4414a-5p	miRNA	salt	salt stress	soybean	salt stress treatment	downregulated	32947244
710	Soybean	gso-miR482bd-5p	miRNA	salt	salt stress	soybean	salt stress treatment	downregulated	32947244
711	Soybean	gso-miR482bd-5p	miRNA	polyethylene glycol	salt stress	soybean	Polyethylene glycol treatment	downregulated	32947244
712	Soybean	gso-miR6300-3p	miRNA	salt	salt stress	soybean	salt stress treatment	upregulated	32947244
713	Soybean	gso-miR9726-3p	miRNA	salt	salt stress	soybean	salt stress treatment	upregulated	32947244
714	Spartina alterniflora	sal-miR164	miRNA	Salt	plant growth and development	Spartina alterniflora (S. alterniflora)	Salt stress treatment	downregulated	26353690
715	Spartina alterniflora	sal-miR168	miRNA	Salt	plant growth and development	Spartina alterniflora (S. alterniflora)	Salt stress treatment	downregulated	26353690
716	Spartina alterniflora	sal-miR169	miRNA	Salt	plant growth and development	Spartina alterniflora (S. alterniflora)	Salt stress treatment	downregulated	26353690
717	Spartina alterniflora	sal-miR171	miRNA	Salt	plant growth and development	Spartina alterniflora (S. alterniflora)	Salt stress treatment	downregulated	26353690
718	Spartina alterniflora	sal-miR393	miRNA	Salt	plant growth and development	Spartina alterniflora (S. alterniflora)	Salt stress treatment	downregulated	26353690
719	Spartina alterniflora	sal-miR395	miRNA	Salt	plant growth and development	Spartina alterniflora (S. alterniflora)	Salt stress treatment	downregulated	26353690
720	Spartina alterniflora	sal-miR396	miRNA	Salt	plant growth and development	Spartina alterniflora (S. alterniflora)	Salt stress treatment	downregulated	26353690
721	Spartina alterniflora	sal-miR399	miRNA	Salt	plant growth and development	Spartina alterniflora (S. alterniflora)	Salt stress treatment	downregulated	26353690
722	Spodoptera frugiperda	Sf-miR-31	miRNA	¦Ã-rays	cell death	Sf9 cell line	¦Ã-radiation treatment	upregulated	26514984
723	Strawberry	fan-miR73	miRNA	abscisic acid (ABA)	fruit ripening and adaptive stress responses	"Roots, stems, leaves and flowers"	abscisic acid (ABA) treatment	downregulated	27325048
724	Sugarcane	sof-miR408	miRNA	acidovorax avenae	acidovorax avenae infection	sugarcane	acidovorax avenae infection	downregulated	29657296
725	Sweet orange	csi-miR156	miRNA	citrus psorosis virus (CPsV)	citrus psorosis virus (CPsV) infection	sweet orange plants	Citrus psorosis virus (CPsV) treatment	downregulated	26033697
726	Sweet orange	csi-miR167	miRNA	citrus psorosis virus (CPsV)	citrus psorosis virus (CPsV) infection	sweet orange plants	Citrus psorosis virus (CPsV) treatment	downregulated	26033697
727	Sweet orange	csi-miR171	miRNA	citrus psorosis virus (CPsV)	citrus psorosis virus (CPsV) infection	sweet orange plants	Citrus psorosis virus (CPsV) treatment	downregulated	26033697
728	Switchgrass	pvi-miR393a	miRNA	cold	cold stress	switchgrass (Panicum virgatum L.)	old treatment at 4¡æ for twenty days	upregulated	29069481
729	Switchgrass	pvi-miR393a	miRNA	1-naphthaleneacetic acid (NAA)	tillering	switchgrass (Panicum virgatum L.)	1-naphthaleneacetic acid (NAA) treatment	downregulated	29069481
730	Syrian hamster	mau-miR-3470b	miRNA	bovine ephemeral fever virus (BEFV)	bovine ephemeral fever virus (BEFV) infection	Baby Hamster Syrian Kidney cells (BHK-21)	bovine ephemeral fever virus (BEFV) infection	upregulated	30587113
731	Syrian hamster	mau-miR-486	miRNA	hyperlipidemic (HL) diet	hyperlipidemia	liver and plasma	"hyperlipidemic (HL) diet (standard chow plus 3% cholesterol and 15% butter, 10 weeks) feed"	upregulated	29725814
732	Syrian hamster	mau-miR-92a	miRNA	hyperlipidemic (HL) diet	hyperlipidemia	liver and plasma	"hyperlipidemic (HL) diet (standard chow plus 3% cholesterol and 15% butter, 10 weeks) feed"	upregulated	29725814
733	Syrian hamster	mau-miR-133a	miRNA	diethylstilbestrol (DES)	dysplasia/neoplasia phenomenon	neonatal Syrian golden hamsters	diethylstilbestrol (DES) treatment	downregulated	28265775
734	Syrian hamster	mau-miR-141	miRNA	diethylstilbestrol (DES)	dysplasia/neoplasia phenomenon	neonatal Syrian golden hamsters	diethylstilbestrol (DES) treatment	upregulated	28265775
735	Syrian hamster	mau-miR-181a	miRNA	diethylstilbestrol (DES)	dysplasia/neoplasia phenomenon	neonatal Syrian golden hamsters	diethylstilbestrol (DES) treatment	downregulated	28265775
736	Syrian hamster	mau-miR-200a	miRNA	diethylstilbestrol (DES)	dysplasia/neoplasia phenomenon	neonatal Syrian golden hamsters	diethylstilbestrol (DES) treatment	upregulated	28265775
737	Syrian hamster	mau-miR-200b	miRNA	diethylstilbestrol (DES)	dysplasia/neoplasia phenomenon	neonatal Syrian golden hamsters	diethylstilbestrol (DES) treatment	upregulated	28265775
738	Syrian hamster	mau-miR-200c	miRNA	diethylstilbestrol (DES)	dysplasia/neoplasia phenomenon	neonatal Syrian golden hamsters	diethylstilbestrol (DES) treatment	upregulated	28265775
739	Syrian hamster	mau-miR-21	miRNA	diethylstilbestrol (DES)	dysplasia/neoplasia phenomenon	neonatal Syrian golden hamsters	diethylstilbestrol (DES) treatment	upregulated	28265775
740	Syrian hamster	mau-miR-29a	miRNA	diethylstilbestrol (DES)	dysplasia/neoplasia phenomenon	neonatal Syrian golden hamsters	diethylstilbestrol (DES) treatment	upregulated	28265775
741	Syrian hamster	mau-miR-29b	miRNA	diethylstilbestrol (DES)	dysplasia/neoplasia phenomenon	neonatal Syrian golden hamsters	diethylstilbestrol (DES) treatment	upregulated	28265775
742	Syrian hamster	mau-miR-429	miRNA	diethylstilbestrol (DES)	dysplasia/neoplasia phenomenon	neonatal Syrian golden hamsters	diethylstilbestrol (DES) treatment	upregulated	28265775
743	Syrian hamster	mau-miR-455-5p	miRNA	pentagalloylglucose (PGG)	viral replication	rabies virus (RABV)-infected BHK-21 cells	pentagalloylglucose (PGG) treatment	downregulated	31243136
744	Syrian hamster	mau-miR-455-5p	miRNA	rabies virus (RABV)	viral replication	BHK-21 cells	rabies virus (RABV) infection treatment	upregulated	31243136
745	Taenia crassiceps	tcr-miR7b	miRNA	praziquantel (PZQ)	cysticercosis	T. crassiceps cysticerci	praziquantel treatment	upregulated	28526608
746	Taxus?chinensis	tch-miR1310	miRNA	methyl jasmonate (MeJA)	taxus chinensis development	Taxus chinensis (T. chinensis) cells	methyl jasmonate (MJ)treatment	downregulated	19393185
747	Taxus?chinensis	tch-miR156	miRNA	methyl jasmonate (MeJA)	taxus chinensis development	Taxus chinensis (T. chinensis) cells	methyl jasmonate (MJ)treatment	downregulated	19393185
748	Taxus?chinensis	tch-miR164	miRNA	methyl jasmonate (MeJA)	taxus chinensis development	Taxus chinensis (T. chinensis) cells	methyl jasmonate (MJ) treatment	upregulated	19393185
749	Taxus?chinensis	tch-miR168	miRNA	methyl jasmonate (MeJA)	taxus chinensis development	Taxus chinensis (T. chinensis) cells	methyl jasmonate (MJ)treatment	downregulated	19393185
750	Taxus?chinensis	tch-miR169	miRNA	methyl jasmonate (MeJA)	taxus chinensis development	Taxus chinensis (T. chinensis) cells	methyl jasmonate (MJ)treatment	downregulated	19393185
751	Taxus?chinensis	tch-miR172	miRNA	methyl jasmonate (MeJA)	taxus chinensis development	Taxus chinensis (T. chinensis) cells	methyl jasmonate (MJ)treatment	downregulated	19393185
752	Taxus?chinensis	tch-miR390	miRNA	methyl jasmonate (MeJA)	taxus chinensis development	Taxus chinensis (T. chinensis) cells	methyl jasmonate (MJ) treatment	upregulated	19393185
753	Taxus?chinensis	tch-miR396	miRNA	methyl jasmonate (MeJA)	taxus chinensis development	Taxus chinensis (T. chinensis) cells	methyl jasmonate (MJ)treatment	downregulated	19393185
754	Taxus?chinensis	tch-miR480	miRNA	methyl jasmonate (MeJA)	taxus chinensis development	Taxus chinensis (T. chinensis) cells	methyl jasmonate (MJ)treatment	downregulated	19393185
755	Tegillarca granosa	tgr-miR-184b	miRNA	cadmium (Cd)	toxic effects of cadmium	blood clam Tegillarca granosa	cadmium (Cd) treatment	dysregulated	24690903
756	Tegillarca granosa	tgr-miR-21	miRNA	cadmium (Cd)	toxic effects of cadmium	blood clam Tegillarca granosa	cadmium (Cd) treatment	dysregulated	24690903
757	Tegillarca granosa	tgr-miR-2a	miRNA	cadmium (Cd)	toxic effects of cadmium	blood clam Tegillarca granosa	cadmium (Cd) treatment	dysregulated	24690903
758	Tegillarca granosa	tgr-miR-33-5p	miRNA	cadmium (Cd)	toxic effects of cadmium	blood clam Tegillarca granosa	cadmium (Cd) treatment	dysregulated	24690903
759	Tegillarca granosa	tgr-miR-8	miRNA	cadmium (Cd)	toxic effects of cadmium	blood clam Tegillarca granosa	cadmium (Cd) treatment	dysregulated	24690903
760	Tibetan schizothoracine fish	tst-miR-124c-3p	miRNA	thermal acclimation	thermal acclimation	Tibetan Schizothoracine fish	exposed to 24¡ãC of 12 hours with heating rate of ~ 0.8¡ãC/h treatment	dysregulated	29045433
761	Tibetan schizothoracine fish	tst-miR-125c-3p	miRNA	thermal acclimation	thermal acclimation	Tibetan Schizothoracine fish	exposed to 24¡ãC of 12 hours with heating rate of ~ 0.8¡ãC/h treatment	dysregulated	29045433
762	Tibetan schizothoracine fish	tst-miR-130c-5p	miRNA	thermal acclimation	thermal acclimation	Tibetan Schizothoracine fish	exposed to 24¡ãC of 12 hours with heating rate of ~ 0.8¡ãC/h treatment	dysregulated	29045433
763	Tibetan schizothoracine fish	tst-miR-139-3p	miRNA	thermal acclimation	thermal acclimation	Tibetan Schizothoracine fish	exposed to 24¡ãC of 12 hours with heating rate of ~ 0.8¡ãC/h treatment	dysregulated	29045433
764	Tibetan schizothoracine fish	tst-miR-145	miRNA	thermal acclimation	thermal acclimation	Tibetan Schizothoracine fish	exposed to 24¡ãC of 12 hours with heating rate of ~ 0.8¡ãC/h treatment	dysregulated	29045433
765	Tibetan schizothoracine fish	tst-miR-145-3p	miRNA	thermal acclimation	thermal acclimation	Tibetan Schizothoracine fish	exposed to 24¡ãC of 12 hours with heating rate of ~ 0.8¡ãC/h treatment	dysregulated	29045433
766	Tibetan schizothoracine fish	tst-miR-25-5p	miRNA	thermal acclimation	thermal acclimation	Tibetan Schizothoracine fish	exposed to 24¡ãC of 12 hours with heating rate of ~ 0.8¡ãC/h treatment	dysregulated	29045433
767	Tibetan schizothoracine fish	tst-miR-3-3p	miRNA	thermal acclimation	thermal acclimation	Tibetan Schizothoracine fish	exposed to 24¡ãC of 12 hours with heating rate of ~ 0.8¡ãC/h treatment	dysregulated	29045433
768	Tibetan schizothoracine fish	tst-miR-738	miRNA	thermal acclimation	thermal acclimation	Tibetan Schizothoracine fish	exposed to 24¡ãC of 12 hours with heating rate of ~ 0.8¡ãC/h treatment	dysregulated	29045433
769	Tibetan schizothoracine fish	tst-miR-7a-2-3p	miRNA	thermal acclimation	thermal acclimation	Tibetan Schizothoracine fish	exposed to 24¡ãC of 12 hours with heating rate of ~ 0.8¡ãC/h treatment	dysregulated	29045433
770	Tibetan schizothoracine fish	tst-miR-7c-1-3p	miRNA	thermal acclimation	thermal acclimation	Tibetan Schizothoracine fish	exposed to 24¡ãC of 12 hours with heating rate of ~ 0.8¡ãC/h treatment	dysregulated	29045433
771	Tibetan schizothoracine fish	tst-miR-7d-3p	miRNA	thermal acclimation	thermal acclimation	Tibetan Schizothoracine fish	exposed to 24¡ãC of 12 hours with heating rate of ~ 0.8¡ãC/h treatment	dysregulated	29045433
772	Tobacco	nta-miR156	miRNA	3-acetonyl-3-hydroxyoxindole (AHO)	systemic acquired resistance (SAR)	Nicotiana	3-acetonyl-3-hydroxyoxindole (AHO) treatment	upregulated	28970509
773	Tobacco	nta-miR172f	miRNA	3-acetonyl-3-hydroxyoxindole (AHO)	systemic acquired resistance (SAR)	Nicotiana	3-acetonyl-3-hydroxyoxindole (AHO) treatment	upregulated	28970509
774	Tobacco	nta-miR172g	miRNA	3-acetonyl-3-hydroxyoxindole (AHO)	systemic acquired resistance (SAR)	Nicotiana	3-acetonyl-3-hydroxyoxindole (AHO) treatment	upregulated	28970509
775	Tobacco	nta-miR408a	miRNA	3-acetonyl-3-hydroxyoxindole (AHO)	systemic acquired resistance (SAR)	Nicotiana	3-acetonyl-3-hydroxyoxindole (AHO) treatment	downregulated	28970509
776	Tobacco	nta-miR156i	miRNA	mock- grown (CK) and 20 % polyethylene glycol	pEG resistance of tobacco	tobacco roots	PEG treatment	upregulated	24664280
777	Tobacco	nta-miR160a	miRNA	mock- grown (CK) and 20 % polyethylene glycol	pEG resistance of tobacco	tobacco roots	PEG treatment	upregulated	24664280
778	Tobacco	nta-miR162	miRNA	drought	drought stress	tobacco	drought treatments	dysregulated	28068898
779	Tobacco	nta-miR166	miRNA	drought	drought stress	tobacco	drought treatments	dysregulated	28068898
780	Tobacco	nta-miR168	miRNA	drought	drought stress	tobacco	drought treatments	dysregulated	28068898
781	Tobacco	nta-miR172b	miRNA	mock- grown (CK) and 20 % polyethylene glycol	pEG resistance of tobacco	tobacco roots	PEG treatment	upregulated	24664280
782	Tobacco	nta-miR390	miRNA	drought	drought stress	tobacco	drought treatments	dysregulated	28068898
783	Tobacco	nta-miR395	miRNA	titanium dioxide (TiO(2))	tobacco growth and development	tobacco	low concentrations (0.1 and 1 %) of TiO(2) nanoparticles treatment	upregulated	24132512
784	Tobacco	nta-miR398	miRNA	drought	drought stress	tobacco	drought treatments	dysregulated	28068898
785	Tobacco	nta-miR399	miRNA	titanium dioxide (TiO(2))	tobacco growth and development	tobacco	low concentrations (0.1 and 1 %) of TiO(2) nanoparticles treatment	upregulated	24132512
786	Tomato	sly-miR1127-3p	miRNA	botrytis cinerea (B. cinerea)	botrytis cinerea (B. cinerea) infection	tomato	botryosphaeria dothidea infection	downregulated	29079899
787	Tomato	sly-miR156e-5p	miRNA	high temperature	heat stress	tomato cultivar ¡°Micro-Tom¡±	plants were exposed to 35 ¡À 1 ¡ãC/30 ¡À 1 ¡ãC (16 h day/ 8 h night) for 12 d	upregulated	29096602
788	Tomato	sly-mir159	miRNA	Tomato leaf curl virus (ToLCV)	leaf curl disease	the leaves of tomato	Tomato leaf curl virus (ToLCV) infection treatment	upregulated	20973960
789	Tomato	sly-miR160	miRNA	hydrogen sulfide (H2S) and H2O2	lateral root formation	tomato lateral root	hydrogen sulfide (H2S) and hydrogen peroxide (H2O2)	upregulated	29029623
790	Tomato	sly-miR160a	miRNA	high temperature	heat stress	tomato cultivar ¡°Micro-Tom¡±	plants were exposed to 35 ¡À 1 ¡ãC/30 ¡À 1 ¡ãC (16 h day/ 8 h night) for 12 d	upregulated	29096602
791	Tomato	sly-miR164a-5p	miRNA	high temperature	heat stress	tomato cultivar ¡°Micro-Tom¡±	plants were exposed to 35 ¡À 1 ¡ãC/30 ¡À 1 ¡ãC (16 h day/ 8 h night) for 12 d	upregulated	29096602
792	Tomato	sly-miR168a	miRNA	Phytophthora infestans (P. infestans)	resistance to P. infestans	tomato plants	Phytophthora infestans infection treatment	"lncRNA39026 might function to decoy miR168a and affect the expression of PR genes in tomato plants, increasing resistance to disease"	31876247
793	Tomato	sly-mir172	miRNA	Tomato leaf curl virus (ToLCV)	leaf curl disease	the leaves of tomato	Tomato leaf curl virus (ToLCV) infection treatment	upregulated	20973960
794	Tomato	sly-miR27	miRNA	high temperature	heat stress	tomato cultivar ¡°Micro-Tom¡±	plants were exposed to 35 ¡À 1 ¡ãC/30 ¡À 1 ¡ãC (16 h day/ 8 h night) for 12 d	downregulated	29096602
795	Tomato	sly-mir319	miRNA	Tomato leaf curl virus (ToLCV)	leaf curl disease	the leaves of tomato	Tomato leaf curl virus (ToLCV) infection treatment	upregulated	20973960
796	Tomato	sly-miR390a	miRNA	hydrogen sulfide (H2S) and H2O2	lateral root formation	tomato lateral root	hydrogen sulfide (H2S) and hydrogen peroxide (H2O2)	upregulated	29029623
797	Tomato	sly-miR393-5p	miRNA	high temperature	heat stress	tomato cultivar ¡°Micro-Tom¡±	plants were exposed to 35 ¡À 1 ¡ãC/30 ¡À 1 ¡ãC (16 h day/ 8 h night) for 12 d	upregulated	29096602
798	Tomato	sly-miR395a	miRNA	high temperature	heat stress	tomato cultivar ¡°Micro-Tom¡±	plants were exposed to 35 ¡À 1 ¡ãC/30 ¡À 1 ¡ãC (16 h day/ 8 h night) for 12 d	downregulated	29096602
799	Tomato	sly-miR397-5p	miRNA	high temperature	heat stress	tomato cultivar ¡°Micro-Tom¡±	plants were exposed to 35 ¡À 1 ¡ãC/30 ¡À 1 ¡ãC (16 h day/ 8 h night) for 12 d	downregulated	29096602
800	Tomato	sly-miR397¨C5p	miRNA	high temperature	heat stress	tomato cultivar ¡°Micro-Tom¡±	plants were exposed to 35 ¡À 1 ¡ãC/30 ¡À 1 ¡ãC (16 h day/ 8 h night) for 12 d	upregulated	29096602
801	Tomato	sly-miR398b-3p	miRNA	high temperature	heat stress	tomato cultivar ¡°Micro-Tom¡±	plants were exposed to 35 ¡À 1 ¡ãC/30 ¡À 1 ¡ãC (16 h day/ 8 h night) for 12 d	upregulated	29096602
802	Tomato	sly-miR398b-3p	miRNA	high temperature	heat stress	tomato cultivar ¡°Micro-Tom¡±	plants were exposed to 35 ¡À 1 ¡ãC/30 ¡À 1 ¡ãC (16 h day/ 8 h night) for 12 d	downregulated	29096602
803	Tomato	sly-miR477-3p	miRNA	Phytophthora infestans (P. infestans)	tomato resistance	tomato	Phytophthora infestans (P. infestans) infection treatment	downregulated	32259631
804	Tomato	sly-miR7b	miRNA	high temperature	heat stress	tomato cultivar ¡°Micro-Tom¡±	plants were exposed to 35 ¡À 1 ¡ãC/30 ¡À 1 ¡ãC (16 h day/ 8 h night) for 12 d	upregulated	29096602
805	Vigna mungo	vmu-miR1511	miRNA	Mungbean Yellow Mosaic India Virus (MYMIV)	Mungbean Yellow Mosaic India Virus (MYMIV) infection	blackgram (Vigna mungo)	infect with MYMIV	dysregulated	28224923
806	Vigna mungo	vmu-miR1514	miRNA	Mungbean Yellow Mosaic India Virus (MYMIV)	Mungbean Yellow Mosaic India Virus (MYMIV) infection	blackgram (Vigna mungo)	infect with MYMIV	dysregulated	28224923
807	Vigna mungo	vmu-miR156	miRNA	Mungbean Yellow Mosaic India Virus (MYMIV)	Mungbean Yellow Mosaic India Virus (MYMIV) infection	blackgram (Vigna mungo)	infect with MYMIV	dysregulated	28224923
808	Vigna mungo	vmu-miR159	miRNA	Mungbean Yellow Mosaic India Virus (MYMIV)	Mungbean Yellow Mosaic India Virus (MYMIV) infection	blackgram (Vigna mungo)	infect with MYMIV	dysregulated	28224923
809	Vigna mungo	vmu-miR160	miRNA	Mungbean Yellow Mosaic India Virus (MYMIV)	Mungbean Yellow Mosaic India Virus (MYMIV) infection	blackgram (Vigna mungo)	infect with MYMIV	dysregulated	28224923
810	Vigna mungo	vmu-miR166	miRNA	Mungbean Yellow Mosaic India Virus (MYMIV)	Mungbean Yellow Mosaic India Virus (MYMIV) infection	blackgram (Vigna mungo)	infect with MYMIV	dysregulated	28224923
811	Vigna mungo	vmu-miR2118	miRNA	Mungbean Yellow Mosaic India Virus (MYMIV)	Mungbean Yellow Mosaic India Virus (MYMIV) infection	blackgram (Vigna mungo)	infect with MYMIV	dysregulated	28224923
812	Vigna mungo	vmu-miR398	miRNA	Mungbean Yellow Mosaic India Virus (MYMIV)	Mungbean Yellow Mosaic India Virus (MYMIV) infection	blackgram (Vigna mungo)	infect with MYMIV	dysregulated	28224923
813	Vigna mungo	vmu-miRn13	miRNA	Mungbean Yellow Mosaic India Virus (MYMIV)	Mungbean Yellow Mosaic India Virus (MYMIV) infection	blackgram (Vigna mungo)	infect with MYMIV	dysregulated	28224923
814	Vigna mungo	vmu-miRn14	miRNA	Mungbean Yellow Mosaic India Virus (MYMIV)	Mungbean Yellow Mosaic India Virus (MYMIV) infection	blackgram (Vigna mungo)	infect with MYMIV	dysregulated	28224923
815	Vigna mungo	vmu-miRn7	miRNA	Mungbean Yellow Mosaic India Virus (MYMIV)	Mungbean Yellow Mosaic India Virus (MYMIV) infection	blackgram (Vigna mungo)	infect with MYMIV	dysregulated	28224923
816	Vigna mungo	vmu-miRn8	miRNA	Mungbean Yellow Mosaic India Virus (MYMIV)	Mungbean Yellow Mosaic India Virus (MYMIV) infection	blackgram (Vigna mungo)	infect with MYMIV	dysregulated	28224923
817	Water buffalo	bbu-miR-106a	miRNA	"glial cell line-derived neurotrophic factor (GDNF), fibroblast growth factor (FGF) 2, and epidermal growth factor (EGF)"	self-renewal and maintenance of spermatogonial stem cells	spermatogonial stem cells (SSCs)	(20?ng mL-1 GDNF +10?ng mL-1 FGF2?+?10?ng mL-1 EGF) treatment	upregulated	30589561
818	Water buffalo	bbu-miR-106a	miRNA	"glial cell line-derived neurotrophic factor (GDNF), fibroblast growth factor (FGF) 2, and epidermal growth factor (EGF)"	self-renewal and maintenance of spermatogonial stem cells	spermatogonial stem cells (SSCs)	"Glial Cell Line-Derived Neurotrophic Factor, Fibroblast Growth Factor 2, and Epidermal Growth Factor (GDNF+FGF2+EGF) treatment"	upregulated	30589561
819	Water buffalo	bbu-miR-20b	miRNA	"glial cell line-derived neurotrophic factor (GDNF), fibroblast growth factor (FGF) 2, and epidermal growth factor (EGF)"	self-renewal and maintenance of spermatogonial stem cells	spermatogonial stem cells (SSCs)	(20?ng mL-1 GDNF +10?ng mL-1 FGF2?+?10?ng mL-1 EGF) treatment	upregulated	30589561
820	Water buffalo	bbu-miR-20b	miRNA	"glial cell line-derived neurotrophic factor (GDNF), fibroblast growth factor (FGF) 2, and epidermal growth factor (EGF)"	self-renewal and maintenance of spermatogonial stem cells	spermatogonial stem cells (SSCs)	"Glial Cell Line-Derived Neurotrophic Factor, Fibroblast Growth Factor 2, and Epidermal Growth Factor (GDNF+FGF2+EGF) treatment"	upregulated	30589561
821	Water buffalo	bbu-miR-21	miRNA	"glial cell line-derived neurotrophic factor (GDNF), fibroblast growth factor (FGF) 2, and epidermal growth factor (EGF)"	self-renewal and maintenance of spermatogonial stem cells	spermatogonial stem cells (SSCs)	(20?ng mL-1 GDNF +10?ng mL-1 FGF2?+?10?ng mL-1 EGF) treatment	upregulated	30589561
822	Water buffalo	bbu-miR-21	miRNA	"glial cell line-derived neurotrophic factor (GDNF), fibroblast growth factor (FGF) 2, and epidermal growth factor (EGF)"	self-renewal and maintenance of spermatogonial stem cells	spermatogonial stem cells (SSCs)	"Glial Cell Line-Derived Neurotrophic Factor, Fibroblast Growth Factor 2, and Epidermal Growth Factor (GDNF+FGF2+EGF) treatment"	upregulated	30589561
823	Yellow catfish	pfu-miR-141-3p	miRNA	17¦Á-ethinylestradiol (EE2)	testis development and spermatogenesis	one-year-old male yellow catfish	intraperitoneal inject 17¦Á-ethinylestradiol (EE2) at a dose of 10 ?g/g body weight treatment	upregulated	25229553
824	Yellow catfish	pfu-miR-200a-3p	miRNA	17¦Á-ethinylestradiol (EE2)	testis development and spermatogenesis	one-year-old male yellow catfish	intraperitoneal inject 17¦Á-ethinylestradiol (EE2) at a dose of 10 ?g/g body weight treatment	upregulated	25229553
825	Yellow catfish	pfu-miR200b-3p	miRNA	17¦Á-ethinylestradiol (EE2)	testis development and spermatogenesis	one-year-old male yellow catfish	intraperitoneal inject 17¦Á-ethinylestradiol (EE2) at a dose of 10 ?g/g body weight treatment	upregulated	25229553
826	Yellow catfish	pfu-miR-200c-3p	miRNA	17¦Á-ethinylestradiol (EE2)	testis development and spermatogenesis	one-year-old male yellow catfish	intraperitoneal inject 17¦Á-ethinylestradiol (EE2) at a dose of 10 ?g/g body weight treatment	upregulated	25229553
827	Yellow catfish	pfu-miR-429b-3p	miRNA	17¦Á-ethinylestradiol (EE2)	testis development and spermatogenesis	one-year-old male yellow catfish	intraperitoneal inject 17¦Á-ethinylestradiol (EE2) at a dose of 10 ?g/g body weight treatment	upregulated	25229553
828	Zebrafish	dre-let-7	miRNA	copper (Cu)	olfactory injury	zebrafish tissue	copper (Cu) treatment	"the epigenetic regulatory mechanisms of metal-induced neurotoxicity of the fish olfactory system, and identify novel miRNA biomarkers of metal exposures."	23745839
829	Zebrafish	dre-let-7b	miRNA	particulate matter (PM2.5)	"hypertension, atherosclerosis and myocardial infarction"	zebrafish (Danio rerio)	fertilized embryos (50 per replicate) were exposed to PM2.5 for 6¨C120 h post-fertilization treatment	upregulated	28215799
830	Zebrafish	dre-let-7d	miRNA	fasted and fluoxetine (FLX)	fluoxetine exposure	zebrafish	FLX treatment	upregulated	24751937
831	Zebrafish	dre-let-7d	miRNA	estradiol-17¦Â (E2)	liver disease	zebrafish liver	estradiol-17¦Â (E2) treatment	downregulated	23767875
832	Zebrafish	dre-let-7i	miRNA	particulate matter (PM2.5)	"hypertension, atherosclerosis and myocardial infarction"	zebrafish (Danio rerio)	fertilized embryos (50 per replicate) were exposed to PM2.5 for 6¨C120 h post-fertilization treatment	downregulated	28215799
833	Zebrafish	dre-miR-1	miRNA	phenylephrine (PE)	myocardium hypertrophy	zebrafish hearts	phenylephrine (PE) treatment	downregulated	32681863
834	Zebrafish	dre-miR-101b	miRNA	estradiol-17¦Â (E2)	liver disease	zebrafish liver	estradiol-17¦Â (E2) treatment	downregulated	23767875
835	Zebrafish	dre-miR-107	miRNA	estradiol-17¦Â (E2)	liver disease	zebrafish liver	estradiol-17¦Â (E2) treatment	downregulated	23767875
836	Zebrafish	dre-miR-122	miRNA	AgNO3	detoxification pathway of heavy metal ions	zebrafish fibroblasts (ZF4) cells	AgNO3 exposure	downregulated	31617658
837	Zebrafish	dre-miR-122	miRNA	lead (Pb)	detoxification pathway of heavy metal ions	zebrafish fibroblasts (ZF4) cells	Pb(NO3 )2 exposure	downregulated	31617658
838	Zebrafish	dre-miR-122	miRNA	ochratoxin A (OTA)	hepatocyte proliferation	embryonic zebrafish liver tissues	OTA treatment	downregulated in liver	29274910
839	Zebrafish	dre-miR-122	miRNA	crude microcystins	hepatosis	the liver tissues	crude microcystins treatment	downregulated	23851223
840	Zebrafish	dre-miR-122	miRNA	triptolide (TPL)	hepatotoxicity	zebrafish larvae	triptolide (TPL) treatment	downregulated	28962522
841	Zebrafish	dre-miR-122	miRNA	particulate matter (PM2.5)	"hypertension, atherosclerosis and myocardial infarction"	zebrafish (Danio rerio)	fertilized embryos (50 per replicate) were exposed to PM2.5 for 6¨C120 h post-fertilization treatment	upregulated	28215799
842	Zebrafish	dre-miR-122	miRNA	paracetamol	liver disease	zebrafish liver	17b-estradiol (E18) treatment	miRNA was substantially upregulated by paracetamol 24 h after exposure	24625211
843	Zebrafish	dre-miR-122	miRNA	valproic acid (VPA)	teratogenesis	zebrafish embryos	valproic acid treatment	exposure to teratogens such as valproic acid alters microRNA expression profiles in developing embryos	24126255
844	Zebrafish	dre-miR-123	miRNA	acetylcysteine	liver disease	zebrafish(3 h poststart of paracetamol exposure)	3 h poststart of paracetamol exposure treatment	upregulated	24625211
845	Zebrafish	dre-mir-125	miRNA	triclosan (TCS)	toxicity of Triclosan (TCS)	zebrafish larvae	Triclosan (TCS) treatment	upregulated	31627110
846	Zebrafish	dre-miR-125a	miRNA	estradiol-17¦Â (E2)	liver disease	zebrafish liver	estradiol-17¦Â (E2) treatment	downregulated	23767875
847	Zebrafish	dre-miR-125b	miRNA	estradiol-17¦Â (E2)	liver disease	zebrafish liver	estradiol-17¦Â (E2) treatment	downregulated	23767875
848	Zebrafish	dre-miR-125b	miRNA	¦Â-diketone antibiotic (DKAs)	liver disease	zebrafish	¦Â-Diketone antibiotics (DKAs) treatment	DKA-exposure at 125 and 25?mg/L significantly increased the expressions of miR-144 and miR-125b	30121499
849	Zebrafish	dre-miR-125b	miRNA	triclosan (TCS)	triclosan (TCS) exposure	zebrafish (Danio rerio)	TCS treatment	dysregulated	29121543
850	Zebrafish	dre-miR-125b	miRNA	"1,25-dihydroxyvitamin D 3 (calcitriol)"	vitamin D-sensitive mRNA concentrations	zebrafish	"1,25-dihydroxyvitamin D 3 (calcitriol) treatment"	upregulated	24650217
851	Zebrafish	dre-miR-126	miRNA	AgNO3	detoxification pathway of heavy metal ions	zebrafish fibroblasts (ZF4) cells	AgNO3 exposure	downregulated	31617658
852	Zebrafish	dre-miR-126	miRNA	lead (Pb)	detoxification pathway of heavy metal ions	zebrafish fibroblasts (ZF4) cells	Pb(NO3 )2 exposure	downregulated	31617658
853	Zebrafish	dre-miR-126	miRNA	estradiol-17¦Â (E2)	liver disease	zebrafish liver	estradiol-17¦Â (E2) treatment	downregulated	23767875
854	Zebrafish	dre-miR-126*	miRNA	estradiol-17¦Â (E2)	liver disease	zebrafish liver	estradiol-17¦Â (E2) treatment	downregulated	23767875
855	Zebrafish	dre-miR-128	miRNA	copper (Cu)	olfactory injury	zebrafish tissue	copper (Cu) treatment	"the epigenetic regulatory mechanisms of metal-induced neurotoxicity of the fish olfactory system, and identify novel miRNA biomarkers of metal exposures."	23745839
856	Zebrafish	dre-miR-132	miRNA	morphine	morphine addiction	embryos of wild-type AB zebrafish line	morphine treatment	"decreases miR-212 , upregulates miR-132"	26947007
857	Zebrafish	dre-miR-132	miRNA	valproic acid (VPA)	teratogenesis	zebrafish embryos	valproic acid treatment	exposure to teratogens such as valproic acid alters microRNA expression profiles in developing embryos	24126255
858	Zebrafish	dre-miR-133a	miRNA	phenylephrine (PE)	myocardium hypertrophy	zebrafish hearts	phenylephrine (PE) treatment	downregulated	32681863
859	Zebrafish	dre-miR-135a	miRNA	ethanol (EtOH)	ethanol-induced apoptosis	zebrafish embryos; neural crest cells (NCCs)	ethanol treatment	downregulated	33134300
860	Zebrafish	dre-miR-137	miRNA	triclosan (TCS)	neurotoxicity	brain tissues	Triclosan (TCS) exposure treatment	upregulated	30496951
861	Zebrafish	dre-miR-138	miRNA	copper (Cu)	olfactory injury	zebrafish tissue	copper (Cu) treatment	"the epigenetic regulatory mechanisms of metal-induced neurotoxicity of the fish olfactory system, and identify novel miRNA biomarkers of metal exposures."	23745839
862	Zebrafish	dre-miR-140	miRNA	ethanol (EtOH)	alcohol-related tissue damage	muscle	ethanol treatment	downregulated	27671199
863	Zebrafish	dre-miR-140-5p	miRNA	fasted and fluoxetine (FLX)	fluoxetine exposure	zebrafish	FLX treatment	upregulated	24751937
864	Zebrafish	dre-miR-142a	miRNA	triclosan (TCS)	triclosan (TCS) exposure	zebrafish (Danio rerio)	TCS treatment	dysregulated	29121543
865	Zebrafish	dre-miR-142a-5p	miRNA	RPS24 morpholino	diamond-Blackfan anemia (DBA)	zebrafish	RPS24 morpholino treatment	upregulated	25189322
866	Zebrafish	dre-miR-142b-5p	miRNA	"2,2',4,4'-tetrabromodiphenyl ether (BDE47)"	neurotoxicity	zebrafish larvae	"2,2',4,4'-tetrabromodiphenyl ether (BDE47) treatment"	downregulated	280728662
867	Zebrafish	dre-miR-143	miRNA	estradiol-17¦Â (E2)	liver disease	zebrafish liver	estradiol-17¦Â (E2) treatment	downregulated	23767875
868	Zebrafish	dre-miR-144	miRNA	¦Â-diketone antibiotic (DKAs)	liver disease	zebrafish	¦Â-Diketone antibiotics (DKAs) treatment	DKA-exposure at 125 and 25?mg/L significantly increased the expressions of miR-144 and miR-125b	30121499
869	Zebrafish	dre-miR-145	miRNA	estradiol-17¦Â (E2)	liver disease	zebrafish liver	estradiol-17¦Â (E2) treatment	downregulated	23767875
870	Zebrafish	dre-miR-146a	miRNA	aeromonas hydrophila and edwardsiella piscicida	edwardsiella piscicida infections	zebrafish	aeromonas hydrophila and edwardsiella piscicida infections	Intraperitoneally (i.p.) injected A. hydrophila and E. piscicida into adult zebrafish showed significant upregulation of miR-146a in gills.	32067211
871	Zebrafish	dre-miR-146a	miRNA	E. piscicida	edwardsiella piscicida infections	zebrafish larvae	E. piscicida infection	The expression of miR-146a was significantly increased in larvae when exposed to E. piscicida infection at 24 and 48 h post exposure (hpe).	32067211
872	Zebrafish	dre-miR-148	miRNA	crude microcystins	hepatosis	the liver tissues	crude microcystins treatment	downregulated	23851223
873	Zebrafish	dre-miR-153b-3p	miRNA	particulate matter (PM2.5)	"hypertension, atherosclerosis and myocardial infarction"	zebrafish (Danio rerio)	fertilized embryos (50 per replicate) were exposed to PM2.5 for 6¨C120 h post-fertilization treatment	upregulated	28215799
874	Zebrafish	dre-miR-155	miRNA	RPS24 morpholino	diamond-Blackfan anemia (DBA)	zebrafish	RPS24 morpholino treatment	upregulated	25189322
875	Zebrafish	dre-miR-15b	miRNA	Korean Red ginseng extract (KRGE)	angiogenesis	Zebrafish embryos	korean red ginseng extract (KRGE)? treatment	downregulated	29021694
876	Zebrafish	dre-miR-16a	miRNA	valproic acid (VPA)	teratogenesis	zebrafish embryos	valproic acid treatment	exposure to teratogens such as valproic acid alters microRNA expression profiles in developing embryos	24126255
877	Zebrafish	dre-miR-17a	miRNA	human chorionic gonadotrophin (hCG)	lung cancer	follicular cells	human chorionic gonadotropin treatment	downregulated	23453964
878	Zebrafish	dre-miR-182	miRNA	light	circadian clockwork	zebrafish pineal gland	light- and dark-ed fish at six circadian times treatment	upregulated	24423866
879	Zebrafish	dre-miR-182	miRNA	neomycin	neomycin-induced ototoxicity	hair cells	neomycin treatment	upregulated	29214789
880	Zebrafish	dre-miR-183	miRNA	light	circadian clockwork	zebrafish pineal gland	light- and dark-ed fish at six circadian times treatment	upregulated	24423866
881	Zebrafish	dre-miR-183	miRNA	neomycin	neomycin-induced ototoxicity	hair cells	neomycin treatment	upregulated	29214789
882	Zebrafish	dre-miR-184	miRNA	¦Â-diketone antibiotic (DKAs)	chronic ototoxicity	otoliths during embryonic-larval development	¦Â-diketone antibiotics (DKAs) exposure treatment	downregulated	30265930
883	Zebrafish	dre-miR-18c	miRNA	valproic acid (VPA)	teratogenesis	zebrafish embryos	valproic acid treatment	exposure to teratogens such as valproic acid alters microRNA expression profiles in developing embryos	24126255
884	Zebrafish	dre-mir-193b	miRNA	bisphenol S (BPS)	Bisphenol S (BPS) toxicity	male zebrafish gonad	bisphenol S (BPS) treatment	upregulated	29180064
885	Zebrafish	dre-mir-193b	miRNA	bisphenol S (BPS)	BPS-induced toxicity	male zebrafish	bisphenol S (BPS) treatment	dysregulated	29180064
886	Zebrafish	dre-miR-199	miRNA	estradiol-17¦Â (E2)	liver disease	zebrafish liver	estradiol-17¦Â (E2) treatment	downregulated	23767875
887	Zebrafish	dre-miR-19a-3p	miRNA	particulate matter (PM2.5)	"hypertension, atherosclerosis and myocardial infarction"	zebrafish (Danio rerio)	fertilized embryos (50 per replicate) were exposed to PM2.5 for 6¨C120 h post-fertilization treatment	downregulated	28215799
888	Zebrafish	dre-miR-19b-3p	miRNA	particulate matter (PM2.5)	"hypertension, atherosclerosis and myocardial infarction"	zebrafish (Danio rerio)	fertilized embryos (50 per replicate) were exposed to PM2.5 for 6¨C120 h post-fertilization treatment	downregulated	28215799
889	Zebrafish	dre-miR-203a	miRNA	triclosan (TCS)	triclosan (TCS) exposure	zebrafish (Danio rerio)	TCS treatment	dysregulated	29121543
890	Zebrafish	dre-miR-205	miRNA	triclosan (TCS)	triclosan (TCS) exposure	zebrafish (Danio rerio)	TCS treatment	dysregulated	29121543
891	Zebrafish	dre-miR-21	miRNA	crude microcystins	hepatosis	the liver tissues	crude microcystins treatment	upregulated	23851223
892	Zebrafish	dre-miR-21	miRNA	polychlorinated biphenyls (PCBs)	skeletal deficiencies	zebrafish embryos	PCB1254 treatment	upregulated	27761858
893	Zebrafish	dre-miR-212	miRNA	MAPK inhibition (U0126)	drug addiction	Zebrafish embryos	MAPK inhibition (U0126) treatment	downregulated	30251655
894	Zebrafish	dre-miR-212	miRNA	morphine	drug addiction	Zebrafish embryos	morphine treatment	downregulated	30251655
895	Zebrafish	dre-miR-212	miRNA	"N-[N-(3,5-Difluorophenacetyl)-L-alanyl]-S-phenylglycine t-butylester (DAPT)"	drug addiction	Zebrafish embryos	"N-[N-(3,5-Difluorophenacetyl)-L-alanyl]-S-phenylglycine t-butylester (DAPT) treatment"	upregulated	30251655
896	Zebrafish	dre-miR-212	miRNA	morphine	morphine addiction	embryos of wild-type AB zebrafish line	morphine treatment	"decreases miR-212 , upregulates miR-132"	26947007
897	Zebrafish	dre-miR-214	miRNA	Korean Red ginseng extract (KRGE)	angiogenesis	Zebrafish embryos	korean red ginseng extract (KRGE)? treatment	downregulated	29021694
898	Zebrafish	dre-miR-217	miRNA	"triazophos (phenyl-1,2,4-triazolyl-3-(o,o-diethyl thionophosphate))"	toluene-induced toxicity	adult zebrafish (Danio rerio)	"triazophos (phenyl-1,2,4-triazolyl-3-(o,o-diethyl thionophosphate)) exposure treatment"	upregulated	30310668
899	Zebrafish	dre-mir-223	miRNA	bisphenol S (BPS)	Bisphenol S (BPS) toxicity	male zebrafish gonad	bisphenol S (BPS) treatment	downregulated	29180064
900	Zebrafish	dre-mir-223	miRNA	bisphenol S (BPS)	BPS-induced toxicity	male zebrafish	bisphenol S (BPS) treatment	dysregulated	29180064
901	Zebrafish	dre-miR-223	miRNA	RPS24 morpholino	diamond-Blackfan anemia (DBA)	zebrafish	RPS24 morpholino treatment	upregulated	25189322
902	Zebrafish	dre-miR-23a	miRNA	Korean Red ginseng extract (KRGE)	angiogenesis	Zebrafish embryos	korean red ginseng extract (KRGE)? treatment	downregulated	29021694
903	Zebrafish	dre-miR-24	miRNA	particulate matter (PM2.5)	"hypertension, atherosclerosis and myocardial infarction"	zebrafish (Danio rerio)	fertilized embryos (50 per replicate) were exposed to PM2.5 for 6¨C120 h post-fertilization treatment	upregulated	28215799
904	Zebrafish	dre-miR-26a	miRNA	estradiol-17¦Â (E2)	liver disease	zebrafish liver	estradiol-17¦Â (E2) treatment	downregulated	23767875
905	Zebrafish	dre-miR-26b	miRNA	estradiol-17¦Â (E2)	liver disease	zebrafish liver	estradiol-17¦Â (E2) treatment	downregulated	23767875
906	Zebrafish	dre-miR-27b	miRNA	crude microcystins	hepatosis	the liver tissues	crude microcystins treatment	upregulated	23851223
907	Zebrafish	dre-miR-29a	miRNA	RPS24 morpholino	diamond-Blackfan anemia (DBA)	zebrafish	RPS24 morpholino treatment	upregulated	25189322
908	Zebrafish	dre-miR-301b-3p	miRNA	"2,2',4,4'-tetrabromodiphenyl ether (BDE47)"	neurotoxicity	zebrafish larvae	"2,2',4,4'-tetrabromodiphenyl ether (BDE47) treatment"	downregulated	280728662
909	Zebrafish	dre-mir-33	miRNA	"2,2',4,4'-tetrabromodiphenyl ether (BDE47)"	neurotoxicity	zebrafish larvae	"2,2',4,4'-tetrabromodiphenyl ether (BDE47) treatment"	downregulated	280728662
910	Zebrafish	dre-miR-33-5p	miRNA	"2,2',4,4'-tetrabromodiphenyl ether (BDE47)"	neurotoxicity	zebrafish larvae	"2,2',4,4'-tetrabromodiphenyl ether (BDE47) treatment"	downregulated	280728662
911	Zebrafish	dre-miR-338	miRNA	RPS24 morpholino	diamond-Blackfan anemia (DBA)	zebrafish	RPS24 morpholino treatment	upregulated	25189322
912	Zebrafish	dre-miR-338	miRNA	estradiol-17¦Â (E2)	liver disease	zebrafish liver	estradiol-17¦Â (E2) treatment	downregulated	23767875
913	Zebrafish	dre-mir-363	miRNA	bisphenol S (BPS)	Bisphenol S (BPS) toxicity	male zebrafish gonad	bisphenol S (BPS) treatment	downregulated	29180064
914	Zebrafish	dre-mir-363	miRNA	bisphenol S (BPS)	BPS-induced toxicity	male zebrafish	bisphenol S (BPS) treatment	dysregulated	29180064
915	Zebrafish	dre-miR-377	miRNA	Korean Red ginseng extract (KRGE)	angiogenesis	Zebrafish embryos	korean red ginseng extract (KRGE)? treatment	downregulated	29021694
916	Zebrafish	dre-miR-430b	miRNA	human chorionic gonadotrophin (hCG)	lung cancer	follicular cells	human chorionic gonadotropin treatment	downregulated	23453964
917	Zebrafish	dre-miR-457a	miRNA	RPS24 morpholino	diamond-Blackfan anemia (DBA)	zebrafish	RPS24 morpholino treatment	upregulated	25189322
918	Zebrafish	dre-miR-459-5p	miRNA	"2,2',4,4'-tetrabromodiphenyl ether (BDE47)"	neurotoxicity	zebrafish larvae	"2,2',4,4'-tetrabromodiphenyl ether (BDE47) treatment"	downregulated	280728662
919	Zebrafish	dre-miR-462	miRNA	hypoxia	embryonic development	"notochord, pharyngeal arch, liver, and gut regions"	Hypoxia treatment	upregulated	26265472
920	Zebrafish	dre-mir-499	miRNA	bisphenol S (BPS)	Bisphenol S (BPS) toxicity	male zebrafish gonad	bisphenol S (BPS) treatment	downregulated	29180064
921	Zebrafish	dre-mir-499	miRNA	bisphenol S (BPS)	BPS-induced toxicity	male zebrafish	bisphenol S (BPS) treatment	dysregulated	29180064
922	Zebrafish	dre-miR-57b	miRNA	valproic acid (VPA)	teratogenesis	zebrafish embryos	valproic acid treatment	exposure to teratogens such as valproic acid alters microRNA expression profiles in developing embryos	24126255
923	Zebrafish	dre-miR-731	miRNA	hypoxia	embryonic development	"notochord, pharyngeal arch, liver, and gut regions"	Hypoxia treatment	upregulated	26265472
924	Zebrafish	dre-miR-731	miRNA	ochratoxin A (OTA)	intracerebral haemorrhage (ICH)	zebrafish embryos	Ochratoxin A (OTA) treatment	upregulated	31675585
925	Zebrafish	dre-miR-731	miRNA	mycotoxin ochratoxin A (OTA)	renal development	embryos	Mycotoxin ochratoxin A (OTA) treatment	upregulated	30090366
926	Zebrafish	dre-miR-733	miRNA	estradiol-17¦Â (E2)	liver disease	zebrafish liver	estradiol-17¦Â (E2) treatment	downregulated	23767875
927	Zebrafish	dre-miR-735-3p	miRNA	"2,2',4,4'-tetrabromodiphenyl ether (BDE47)"	neurotoxicity	zebrafish larvae	"2,2',4,4'-tetrabromodiphenyl ether (BDE47) treatment"	upregulated	280728662
928	Zebrafish	dre-miR-7a	miRNA	particulate matter (PM2.5)	"hypertension, atherosclerosis and myocardial infarction"	zebrafish (Danio rerio)	fertilized embryos (50 per replicate) were exposed to PM2.5 for 6¨C120 h post-fertilization treatment	downregulated	28215799
929	Zebrafish	dre-miR-7a	miRNA	copper (Cu)	olfactory injury	zebrafish tissue	copper (Cu) treatment	"the epigenetic regulatory mechanisms of metal-induced neurotoxicity of the fish olfactory system, and identify novel miRNA biomarkers of metal exposures."	23745839
930	Zebrafish	dre-miR-96	miRNA	¦Â-diketone antibiotic (DKAs)	chronic ototoxicity	otoliths during embryonic-larval development	¦Â-diketone antibiotics (DKAs) exposure treatment	downregulated	30265930
931	Zebrafish	dre-miR-96	miRNA	neomycin	neomycin-induced ototoxicity	hair cells	neomycin treatment	upregulated	29214789
932	Zebrafish	dre-miR-965	miRNA	light	circadian clockwork	zebrafish pineal gland	light- and dark-ed fish at six circadian times treatment	upregulated	24423866